| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_5006 |
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| Symbol | |
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| ID | 6289891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010683 |
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| Strand | - |
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| Start bp | 54052 |
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| End bp | 54462 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642627400 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001901366 |
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| Protein GI | 187930880 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 0.0840995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.821315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCCT TCGTTCGCTT CATTTGCGCG CTGATGCTCG CCGCCGCTCT GCCCGCCAGC
GCATTCGCGG CTCCGAATGC GTACAACTTC GGCTGGACCA CCAGCGGCGC CGACATGGTG
AAACCGTTCC AAGTCTTCGA CGATGGCCAG TACATCTACG TCCAATTCGA TGATCCGGCG
CACGTGCCCG CCATCCTCAC TGAGACGCCC AACGGCACCG CACTTCTCAG CTGGCGCCGC
AGCTATCCAT ACATCGTCAT CAGCTATCAG GCCAATGTGC TGATCTTCCG CGCGGGCAAC
CAGGAAGCTC GGGCAACGAG GTGGTACGTG GATGGTGTGC CACAGGTGGT GTTGCGCGGC
GCTGCCGCGC CGGTCAAGAC CACGGGCGCA GCGGCGTCAC AAGACCAGTA A
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| Protein sequence | MKSFVRFICA LMLAAALPAS AFAAPNAYNF GWTTSGADMV KPFQVFDDGQ YIYVQFDDPA
HVPAILTETP NGTALLSWRR SYPYIVISYQ ANVLIFRAGN QEARATRWYV DGVPQVVLRG
AAAPVKTTGA AASQDQ
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