Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4984 |
Symbol | |
ID | 6289929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010683 |
Strand | + |
Start bp | 33683 |
End bp | 34288 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642627379 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001901345 |
Protein GI | 187930859 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0145131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAG TCAGCGCCAA GATTCTTTGC ATTGAAGACG ATATTGAAAC CGCCGAACTG ATCGCCGAAG AGTTGGCTGA ACATGGCTAT ACCATCGTCA CGGCGCACGA CGGAGAGTCC GGTCTGGCGA TGCTCCTGCG CGAAGCCCCC GATCTTGTGC TATGCGACGT GGGCATGCCG GGCATGACAG GGTTCGAGTT GCTGGAGCAG TTGCGCACGC TCGCGCCACG GTATGCCGAG ATTCCGTTCG TCTTTCTGAC GGCGATGGCG CAACGCGACT CCGAACTGCG CGGGCGGCGC CTGGGGGCCG ATGACTACGT GACCAAGCCG GTCGATTTCG AAATCCTGAT TAGCATCGTG CAGACCCGGC TCGCCAGACG GCCGCGCACG CATGCCGCGC ATCCGCCCGT ACAACTGAGC GAGCGCGAGG CCGAGGTGCT GGCATGGTCT GCGCGCGGCA AGACATCGGG TGAGATCGCC ACGATTCTTG GGCTCTCCAA GCGAACGGTC GATTTCCATA TGGACAATGC GCGCGAAAAG CTGGGCGTCG CCACGCGCAT AGAAGCCGTG GTCAGGGCAT CCAGTGCAGG GATCATTAAG CCGTAA
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Protein sequence | MKPVSAKILC IEDDIETAEL IAEELAEHGY TIVTAHDGES GLAMLLREAP DLVLCDVGMP GMTGFELLEQ LRTLAPRYAE IPFVFLTAMA QRDSELRGRR LGADDYVTKP VDFEILISIV QTRLARRPRT HAAHPPVQLS EREAEVLAWS ARGKTSGEIA TILGLSKRTV DFHMDNAREK LGVATRIEAV VRASSAGIIK P
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