Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3731 |
Symbol | |
ID | 6287126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3910959 |
End bp | 3911675 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642627315 |
Product | GntR domain protein |
Protein accession | YP_001901281 |
Protein GI | 187930794 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAC GACTCGACGC CGCGCCCTCC CTGTCCGACC GCGTGGCCCA GACCCTGATG GACAAGATCG ACGCGGGCGA ACTGCGCCGC GGCGAACGCA TGCCGTCCGA AACCGTGCTC GGGCAGGAAT TCGGTGTGAG CCGAACCGTG ATCCGCGAGG CCATCTCGCG TCTGCGCCAC GAAGGCGTGG TCGAAGCGCG CCAGGGCAGC GGCGTGTACG TCACTCAGCA GGCTGGCCTC AAGCCGCTGC GGATCGACGC GGCGCAAGCC GGCTCGATCG ATGCCGTGCT GCACATCATC GAACTGCGCC GTGCGCTGGA GGCTGAAGGC GCCGCCCTCG CGGCCCAGCG CCGCACCGAC GCCGAGATGA TCGAGATCGA CGCCGCACTC GACAGCATCG ACGCTGCGGT GGCGGCCGGC GGTGACGGCG TGACCGAAGA CCTGCGTTTT CACCGCGCCA TCGCGGCCGC CAGCGGCAAT CCGTTCCTCG TGCAGGCACT CGGCTTTTTC AGCCAATACC TGGAGGAAGC GATCGGCGTG ACGCGCAGCA ACGAAGCGCG CCGCGAAGAC TTCGCCCGCC AGGTCCGCGA CGAGCACCGC GCGATGGTCG AAGCGATCCG CCACCGCGAC GCACTCGCTG CACGCAATGC CGCGCAGACC CACATGTTCA ATGCCGCACG TCGCTTGGCC GAGGGCCGCG ATGCAGCGCA AGACTGA
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Protein sequence | MFERLDAAPS LSDRVAQTLM DKIDAGELRR GERMPSETVL GQEFGVSRTV IREAISRLRH EGVVEARQGS GVYVTQQAGL KPLRIDAAQA GSIDAVLHII ELRRALEAEG AALAAQRRTD AEMIEIDAAL DSIDAAVAAG GDGVTEDLRF HRAIAAASGN PFLVQALGFF SQYLEEAIGV TRSNEARRED FARQVRDEHR AMVEAIRHRD ALAARNAAQT HMFNAARRLA EGRDAAQD
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