| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3685 |
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| Symbol | |
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| ID | 6288225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3862171 |
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| End bp | 3863859 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642627269 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001901235 |
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| Protein GI | 187930748 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.354972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC AGAACCGCGA ACCGGTCAAT TATCTGGCAG GCGAGATGCC GCTGCACCGG
TATTGCGCCC ACCATGCGCA GCAAACGCCC GAGCGCATCG CCCTGTTGTG GTACGGCCGC
ACGATCTGCT GGCGCGAGCT GGATCAGGCC TCGACGCGGC TGGCGGTGCA GTTGCAGCGG
CTGGGCGTGA CGCGTGGCGA TCGCGTTGCA CTGTTTCTGC ACAACTGCCC GCAAGCCATC
ATTGCCCATC TGGCCACGGC CAAGCTGGGT GGCATCGTCG TGCCGTGCGG GCCGCTGTCG
CGTCAACACG AGCTGCGCGA CCAACTGACC GATTCTGGCG CCAAGATTCT GGTGGCCGCG
GCAGACCTGA TGCCGATCGT CGAGGCCGCC CGGCCCGGCA CGTCGGTCAT GACCGTCATC
ACGACGCGCT ATGCCGATCT GCAGCCCGCG CAGCCGGCCT GCCGCAAGGC GCTGGCCGTG
CCGCCCGAAC TGATTGCCGC CGATGCCTCG TCGGCGCCGC CGCTCAAGAA CAAGCCGGGC
GCCGCGCAGC TTGACCTGAT GCAGCTGATG GCTGAGCCCG TGGATGTGGC TGAGCGCAAC
GCCGTGGCGG CTATCCAGGT GAGCCTGGAT GACGTCGCGC TGATGGTCTA CACCTCCGGC
ACCACCGGCC GCCCGAAGGG CGCCATGCTC ACGCATCGCA ACGCACTGTA CAAGACCGCC
GTCACGGTGC AGGTCAGCGG CATCCACGCC TCGGACGTGA TGCTGGCGGT GGCGCCGCTG
TCTCATATCG CCGGCATGCT GATGGGCATG AACGTGATGC TGTATTCCGG CGCGACGACC
ATCCTGCTCT ATCGGTTCGA TCCCCTGGCG GTGCTGCAGG CCATTGACCG CTACCGCGTG
ACACGCTGGT ACAGCATGAC GCCAATGAAC CTCGCGGTCA TGGCGCATCC GGACGCGGCG
CAGTACCGCA TGGAATCCTT GGTGGCCAAC CCGTGCACCA GCTTCGGCGT CACGCTGACA
GAAGCGATTG CCGAGCAGTG GCGTGCCTTT GCCGGCCCGC AGTGCCGCAT CTACGAAGCC
GCCTATGGCC TGTCGGAAAC CCACACCTGC GACGCCATCA CGCCCGCCGA TGCCCCGCGC
TGGGGTTGGC ACGGCAAGAT CGTCCCGCAG ACTGAGGTGC GCATCGTCGA CCCGCATACC
GGCGCTGAAC TGCCACCCGG CCAGGCTGGC GAAATCACCA TCCGCAGCCC CGGCGTGTTC
CGTGGCTACT GGCAGCGAGA CGAGGCCACG CGCGCCGTCC TGCACAACGG CTTTCTGCGC
ACCGGCGACA TCGGCCAGGT CTCGCCCGAC GGCTACCTTC AATGGCAGGG CCGCATCAAG
GAAATGATCA AGGTGTCGGG CTACAGCGTG TTTCCGGAAG AGGTCGAGGC GCTGCTGTCG
CGCCATCCGG GCATCCGCCA AGTGGCCGTG ACGCCCATCC CCGATCCCGA AAAAGGCGAG
GTCGTCTGCG CGCACGTGGT GCCGATGACC GGTGTAACGC TCTCGGAAGC CGAACTGATT
GCCTGGTCGC GCGACAACAT GGCGCCGTAT AAGGTGCCGC GGCGCGTGAA GTTCCATGAG
GCGCTGCCGG CTACCGCGAC GGGCAAGGTG CTGCGAAGGT TGTTGCGCGA AGACGCCATC
GCCGCGTGA
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| Protein sequence | MTIQNREPVN YLAGEMPLHR YCAHHAQQTP ERIALLWYGR TICWRELDQA STRLAVQLQR
LGVTRGDRVA LFLHNCPQAI IAHLATAKLG GIVVPCGPLS RQHELRDQLT DSGAKILVAA
ADLMPIVEAA RPGTSVMTVI TTRYADLQPA QPACRKALAV PPELIAADAS SAPPLKNKPG
AAQLDLMQLM AEPVDVAERN AVAAIQVSLD DVALMVYTSG TTGRPKGAML THRNALYKTA
VTVQVSGIHA SDVMLAVAPL SHIAGMLMGM NVMLYSGATT ILLYRFDPLA VLQAIDRYRV
TRWYSMTPMN LAVMAHPDAA QYRMESLVAN PCTSFGVTLT EAIAEQWRAF AGPQCRIYEA
AYGLSETHTC DAITPADAPR WGWHGKIVPQ TEVRIVDPHT GAELPPGQAG EITIRSPGVF
RGYWQRDEAT RAVLHNGFLR TGDIGQVSPD GYLQWQGRIK EMIKVSGYSV FPEEVEALLS
RHPGIRQVAV TPIPDPEKGE VVCAHVVPMT GVTLSEAELI AWSRDNMAPY KVPRRVKFHE
ALPATATGKV LRRLLREDAI AA
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