Gene Rpic_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3615 
Symbol 
ID6289001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3785538 
End bp3786422 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content69% 
IMG OID642627199 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001901166 
Protein GI187930679 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGAGA TCAGCCTGGA CCGCCTGCGC ACCCTCGTCG AAGTCGCCGG CCGCGGATCG 
TTTGCCGACG CGGCGCGGGC CCTGCATCTG GCAGCGCCCA CCGTGAGCCT GCATATCGCC
GAGCTGGAAG ATCGCGTGGG CGCGCAACTT CTGTCACGCA AGCGCGGGCA GGTGCAGCCC
ACCGCCATTG GCGAGGTGAT GGTGGAGCGC GCGCGCAAGC TGCTCGCCGA TGCCGAGCAG
GCGCTGGACG ACATCCAACG CCAGGTGCAG GGACTGAGCG GGCGCGTACG GCTGGGCGCC
TCCACCGGCG CCATCGCGCA TCTGCTGCCG CAGGCGCTGG AGGTGCTCCG GCAAGACCAC
CCTGGCATCG ACGTGCAGGT GGCAGTGCTC ACTTCGCAGG AAACGCTGGC GGGTCTGGCC
GATGGCGCGC TCGACATTGG CCTTGTGGCG CTGCCGCAAT CGCAGGTGGC GGGGCTGGCG
ATCAAGCCGT GGCGGCGCGA TCCCGTGATG GCGTTCCTGC CTTCGCACTG GACGAGTCCG
GCACGCATCA CGCCCGCGTG GCTTGCCGCG CAGCCGCTGA TCCTGAACGA CGCCACCACA
CGTCTCTCGC GCCAGACGAC CGAGTGGTTC GCCACGGACG GTTATCACCC CGTGCCGCGC
ATCCAGCTCA ACTACAACGA CGCTATCAAA AGCCTCGTTG CCGCCGGTTA TGGCGCCACG
CTGCTCCCGC ACGAGGCGTC CGCCGTACCG TCGGATGTGC GCATCACCAT GCGGCCGCTG
CGGCCGGCGT TGTGGCGTGA ACTTGGCATC GCGCACCGGG CCGGCCACGT CGAGCGATCG
ACGCAGCACG TGCTGGACGT GCTTTGGATG CTGCGCGCGA AATAG
 
Protein sequence
MREISLDRLR TLVEVAGRGS FADAARALHL AAPTVSLHIA ELEDRVGAQL LSRKRGQVQP 
TAIGEVMVER ARKLLADAEQ ALDDIQRQVQ GLSGRVRLGA STGAIAHLLP QALEVLRQDH
PGIDVQVAVL TSQETLAGLA DGALDIGLVA LPQSQVAGLA IKPWRRDPVM AFLPSHWTSP
ARITPAWLAA QPLILNDATT RLSRQTTEWF ATDGYHPVPR IQLNYNDAIK SLVAAGYGAT
LLPHEASAVP SDVRITMRPL RPALWRELGI AHRAGHVERS TQHVLDVLWM LRAK