Gene Rpic_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3494 
Symbol 
ID6286135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3658614 
End bp3659837 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID642627079 
Productsodium/hydrogen exchanger 
Protein accessionYP_001901046 
Protein GI187930559 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCA TGACAGGACT TCACGATCTC TTCCCTTCGT GGCCGCCCGC GCCTGGCGGT 
CTTTTCTGGA TCGGCCTGGC GCTGGTCGGC GCGGCGCTGT GTGGCGAGTT TGCGCGTGCG
GCGCTCAAGC TGCCCCGTAT CGTCGGCTAT GCGGCGGCGG GGCTGGTGGC CGGCGTGCTC
GGCCGCCCGC TCATCGACAC CGACATGCTC GACCAGACCC ACATCCTGAT CGAGATGGCG
CTGGCGTTGG CGCTGTTCGA GCTGGGGCAC CGGCTGTCGT TCGAGTGGCT GCGTGCCAAC
CGTTGGCTGT TGCTCACCAG TGGCTTCGAG AGCCTGCTGA CTTGGGGCCT GGTCACCTGG
GTGTTGCAGC TGTTTGGCGT GACGGCGTCG GTGGCGGTGG CCGCAGGCGC CATCGCGGTG
GCCACGTCCC CGACGGTGCT CCTGCAACTC AAGAACGAAC TGCGCGCCGA AGGCCAGGTG
ACGGAGCGAT TGCTCTCGCT GGGCGCGCTC AACAGCATCT ACGCAAGCGT GCTGGTGCCG
CTGACCGCCG GCTGGCTGCA CAGTGAATAC GGCCACTGGG CGGCGGCGCT GATCCACCCG
CTCTACCTGC TGGCAGGTTC CGTGCTTCTG GCCTGGGTGG TCGGCAAGGT GGGCCATGCG
CTGTATCACC GCATGGCGGG TGACGATCAC TATGCATTCC TGGTGCTCGT CGGCCTGGTG
CTGTTTGCAC TGGCGATGGC CAAGCTGCTC AAGCTGTCGG TACCGCTCAC GCTGCTGTTG
GCAGGCGTTG TGTTCAAGCA TCAGGACGAT CACCCGCGCG TGTGGCCGTC GCACTTCGGT
AGCGCGGGCA GCATCCTGAT CGTGGTGATG ATCGTGTCGC TCGGCTTGCC GCTCAAGGCG
TCGGACTGGG TGATTGGCGG TGTGGCGGCG GTGGCGTTGG TGCTGTCGCG CTTTATCGCC
AAACTGGCGG CCACGACGGC GCTGGGCTCG TTCACGGGCC TGTCGATGCG GCAGAGCATC
GCGCTGGGCC TGGCCCTTGG GCCCATGTCC GGACTGTCAT GGTTGCTGAT GCACGATACG
GCGGCTTTGT ATCCGCAAAC CGGTGGTCCG CTGGCGGCCA TCATCCTGTG CACGCTGGCG
ATCCAGCAGA TTGCTGCGCC GATCCTGACC GCGCGTTCGC TGCGCTGGGC AGGTGAGGTG
CGACAAGACG AAGGGAGGCA CTGA
 
Protein sequence
MSPMTGLHDL FPSWPPAPGG LFWIGLALVG AALCGEFARA ALKLPRIVGY AAAGLVAGVL 
GRPLIDTDML DQTHILIEMA LALALFELGH RLSFEWLRAN RWLLLTSGFE SLLTWGLVTW
VLQLFGVTAS VAVAAGAIAV ATSPTVLLQL KNELRAEGQV TERLLSLGAL NSIYASVLVP
LTAGWLHSEY GHWAAALIHP LYLLAGSVLL AWVVGKVGHA LYHRMAGDDH YAFLVLVGLV
LFALAMAKLL KLSVPLTLLL AGVVFKHQDD HPRVWPSHFG SAGSILIVVM IVSLGLPLKA
SDWVIGGVAA VALVLSRFIA KLAATTALGS FTGLSMRQSI ALGLALGPMS GLSWLLMHDT
AALYPQTGGP LAAIILCTLA IQQIAAPILT ARSLRWAGEV RQDEGRH