Gene Rpic_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3402 
Symbol 
ID6286493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3563007 
End bp3563690 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content66% 
IMG OID642626987 
Producthypothetical protein 
Protein accessionYP_001900955 
Protein GI187930468 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.278918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCA CGGAATCCAC ATCGCCCACC GCACGCACCC GCGTGCGCCG CGTCGCGCAC 
CGCGGCCACT ACGACCGCAC CACGCTGCAC GCCATCCTCG ACGAGGCTTA CGTCTGCCAC
ATCGCCTTCG CCGACGAGCA TGGTGTGCAC TGCATCCCGA CCGCGTGCTG GCGCGAGGGC
GGTCATCTCT ACATCCACGG TTCCAACGGC AGCCGCATGC TCAAGCTGGC AGGCAGCGGT
GCGCAGGTCT GCGTGACCAT CACGCACATC GACGGCCTGG TGCTGGCGCG CTCGGCGTTC
AACCATTCCA TGAATTACCG CTCGGCCGTC ATCTACGGTG CGTTCGAAGT TGTGCCCGAT
GCGCAGAAAG CTGGGGTGCT CGATACCTTC ATGGAAGTGC TCGCGCCTGG CCGTTCGCGA
CAGGCGCGGC CCGGCAATGC CAAGGAACTC GCTGCCACGA CCGTGCTGCG CATTCCGCTG
GATGAAGCGG CGTGCAAAGT GCGCACGGGC GGGCCGAAGG ATGATGCTGA AGACCTTGAC
TTGCCTGTGT GGGCTGGGGT GCTGCCGATG GCGCTGTTGC CGTTGCCGCC GGTGGTGGAG
GCCGCGCCGG CGGGTACGCC TGACTATGTG CAGGAGTGGA GGGATAGTAC GCGGGTGCCG
GTGGGGGATG TGGTGATGTC GTGA
 
Protein sequence
MSTTESTSPT ARTRVRRVAH RGHYDRTTLH AILDEAYVCH IAFADEHGVH CIPTACWREG 
GHLYIHGSNG SRMLKLAGSG AQVCVTITHI DGLVLARSAF NHSMNYRSAV IYGAFEVVPD
AQKAGVLDTF MEVLAPGRSR QARPGNAKEL AATTVLRIPL DEAACKVRTG GPKDDAEDLD
LPVWAGVLPM ALLPLPPVVE AAPAGTPDYV QEWRDSTRVP VGDVVMS