Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3396 |
Symbol | |
ID | 6289528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3554270 |
End bp | 3555700 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642626981 |
Product | General secretion pathway L |
Protein accession | YP_001900949 |
Protein GI | 187930462 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGACCT CCCTGTACGT GCGCCTGCCG CACCGGCCCA TTCAATCGCC CGAACGCTGG TCGACGGGCG CGCTTGCCTC CGTGCCGTTC GCGCTGGTGC GTGAAGAAGG CGCGCTTGGG ACCCAACGCG TTCAGCGCGA AGGCACGTCG CGCACCGACG AACTGCCCGC GGCCGATCGG CTGGTCCTCC TGCTGCCCGC CGCCGATGTG TTGCTGGTGC CGGCCAACGT GCCGCCGCTG GCGCTGCCCA AACTGCGTCT GGCCCTGCCC AACCTGGTGG AAGAGCGCCT CGTGCAGGAT GCGCAGCAGT GTCATATCGC CCTTGGGCCC CGCCTGGGTG ATGCCCCCGC ACGCAACTGG CGGGCACCCC GCGAGCCACA ATCGCGCGCA TTGATGATTG CCGACCGCGC GTGGGTCCGC TTCATCCTCG ATACCTTTGC CGGCCACAAG CACCGCACCT GCCATCTGCT GCCTGCGCAG CTTTGCCTGC CGTTTGAAAC GCCTGCCGCA GCCGCAGCGC TGGCTGCAGA ACCGACAAAC GCGGTCGAAC GTGCGGAGCC GTCGCTCGAT GCTTCTGCTG AACCTGTTGT CGAAATGCCC GTGGCTGAAG CCGTTGCGGC GGTCGCCCCA GCAACCATCG CGCTCGACGC AGCGCCACCG TCCGACCCGG ACGCGCCCGT CGCCATCGAC ATCACCGTAC GCACCGGCCG CGCCGAGGGC TACGGCCTGC GCGTGCTGCC GGCCAACGTC GGCAACTGGC TGGGGATTGC ACCCACGCCG GCCACGCTGA TGGTGTCGCC CGCGCTGCGC GAGTTGGCGC CCGGCCTGTC GACCGACCCC GCCACCGCCA CGCTGGACTG GTCCACCTGG GCAGCCGGCG CACGCGACGC CCTCGCTTCA GGCGAAGCCG ATCTTTGTCA GTTCGACTTT GCACGCGGCG GCGTGGCCGG CGTGGACTGG AGCCTCTGGC GCCTGCCGAT CGCACTGGCC GTGCTGCTGG TGGTCGTGCA GCTCATCGGC ATGAACGCGC GCTGGCTCAC GCTGCGCGCC GAGCAGAAGC GGCTCGATAC CGCCATGCGC GCGCAGTTGC AGACAGCCTT CCCGAATACG CCGGTGATCC TCGATCCGCC CGCGCAGATG CGCCGCCAGG TCGAGCAGCT GCGCCTGGCC GCCGGCAAGT CGGCTCCGGA AGACTTCCTG CCGCTGGCCG ATCGCTTTGC CCAGGCCGCC ACCGGTCTCG CGCCCGATGC GCTTCTCGCG CTCGATTACC ACGGCCGCGC GCTCACGGTC ACACTCAAGG ACGGCACCGA CACCGCCAGC CTGCGCACCG CGGCCCGCAA TGTCGGCCTG AACATGGACA CCGCCGAGGC CCCGCGCGGT GCCGAGGCGA CCGTACCGGG CTCGCGCTGG ACGGTCTCCA TCGCCCAATA A
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Protein sequence | MTTSLYVRLP HRPIQSPERW STGALASVPF ALVREEGALG TQRVQREGTS RTDELPAADR LVLLLPAADV LLVPANVPPL ALPKLRLALP NLVEERLVQD AQQCHIALGP RLGDAPARNW RAPREPQSRA LMIADRAWVR FILDTFAGHK HRTCHLLPAQ LCLPFETPAA AAALAAEPTN AVERAEPSLD ASAEPVVEMP VAEAVAAVAP ATIALDAAPP SDPDAPVAID ITVRTGRAEG YGLRVLPANV GNWLGIAPTP ATLMVSPALR ELAPGLSTDP ATATLDWSTW AAGARDALAS GEADLCQFDF ARGGVAGVDW SLWRLPIALA VLLVVVQLIG MNARWLTLRA EQKRLDTAMR AQLQTAFPNT PVILDPPAQM RRQVEQLRLA AGKSAPEDFL PLADRFAQAA TGLAPDALLA LDYHGRALTV TLKDGTDTAS LRTAARNVGL NMDTAEAPRG AEATVPGSRW TVSIAQ
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