| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3348 |
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| Symbol | |
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| ID | 6286315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3505197 |
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| End bp | 3507470 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626932 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001900901 |
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| Protein GI | 187930414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.703913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACTC ATTCCCTGTT TTGCACGCGG CGACTGTGGC CGCTCGCATC GCTCCTGCTC
TTGCTGATGG CGTGCGTCGC CAACATGGCC GATGCCGCGC CGGTGTCGTT TGCCAAGCTG
GCCGGGCTGC CGACTTCCAC CGCCAGCGCA TCGGCGCCCG CGGCGGACCC TGCGCAGACG
CGCCAGTCGC TCGACACCGT CATCACGCTG CTCAACAACG ACCAGCAACG CACCGCCCTC
GTCAATGAAC TGAAGCAGTT GCGAGACGGC ATGAGCGCGC AGCAGAAGGT GCAGGCCGAA
CAGGCGCCGG GCCTGCTGGG CGCGGTGGCT TCGCTCATCG AGAACGGCTC GTTGCAGGCC
GATGTGGAAG CCGGTGCGCC GCGCTACTGG CTGCGCCGCA TCGAGGCCGC CAGCGGGAAC
GCGAGCCTGC TCGTCGCGCC CGAGAAGCGC ATGCCGCTGC TTGCCGACCT TGCGAGCACC
GTTGGCATCT GGGCCGCCAT CGCCGCTGGC CTGCTGGGCC TGGGCTGGTT GATCCGCCGC
GTGTTTGGCC TCACCGTGGG CCTCGGGCCG CACCCGACGA CGCGCGCGCT ATTGATCGAC
GCGCTGCGCA AGATCGGCCC GTGGGCGATT TCCTTTGCCG TCATCATGCG GCTCGACCAC
GACGCCTCGC CGGGCTTCGT CCTGGCGCTG GTGCTGGCCT ACGCCATCGT ATGGGGCGCG
ATCATCACGG CGGGCGTGGC GATGCTGTTC TCGCTGTTTT CCGGCAGCGC GCATCGGCGC
GTGGCAGTGG AATACCTGTT CAAGCATGGC ATGTGGCCGA TCTTTCTGAC GGCCAGTCTG
GGCGCCTGCG GCGATGCGCT GGTGGACCCG CGCGTCGCGT TGGTGCTGGG CGGCTCGCTC
AGTCTGCTGC TGGCCACGGT GTGCAACGTG GTGTCTTCAT TGATGCTGGC GGTGGGCGCG
TTGTGGGCGC GGCGGCCCAT CGGCCAGTTG ATCGCCAATC GTCCGCTGGA GCTGCGCAGC
GGCGAACACA CGGGCAATCA GATCCGTCGC CTGCTGGCGG CGTTCTGGCC AGTGCCGGTG
GTGGTGCTGG CGGGCGCCAC CGTCATGGCC ACGCTGACGA TGCCCGACAA CGTTGACGTC
GTGGCGCGCC GCGCGGTGAT GACGTCGCTG CTGCTGGTGG CCGCCTTCTT CCTGTCGGCG
CTGGTCCGCC CCCGCGCGAA TTGGCGCGCG CACCTGCGTC TGACGCGCAG CTCGCCTTAT
CTCGAGCGGC TCAAGCATTT TGTTGGCGCG CTGATCAAGC TCGTCATCTG GATCGCCTTC
CTAGAGCTGG TGCTGCGCGT GTGGGGCCAT ACGCTGGTGG AGGTCACACA CAGTTCGGTC
AACGGCAAGC GCATCGCCGA TGCCTTGGTG GGCCTGATCG GCACCGTGTT TGCCACCTGG
CTCGTCTGGA TCCTGCTCGA CACGGCGATC CTGCGGGCGC TGTCGCCGGC CTCCGCGCGG
GCGCAGCCCA GCACGCGTGC ACTGACCATC CTCCCGCTGC TGCGCAATGG CCTGAAGGTG
ACGCTGGTGG TGACGGCCAG CATTGGCGTG CTGGCCAACC TGGGCGTGAA CGTGACGCCG
CTGGTGGCCG GCGCCGGCGT GATCGGCCTG GCGGTCGGCT TTGGCGCGCA GTCGCTGGCG
CAGGACTTCA TCACCGGCAT CTTCATCCTG ATGGAAGACA CGATCAGCGT AGGCGATGTG
GTGGACGTGG GCGTGGCCAC GGGCTCCGTC ATCAACCTGA CTATCCGGAC GGTGCGGCTG
CGCGATGGCA CGGGCGCGGT GCTGTCGATT CCGTTCAGCC AGATCAAGAC CGTGCGCAAC
CTCTCGCGCG ATTACTCGTT TGCCGACTTT GAAGTGCGCG TGGCGATGGA GGCCGAGCCC
CAGCAGGCGA TCGATCTCGT GCGCGCGGCG GCTGACCAGA TTGCGGGTGA GCCGCGCTTT
GGCTACACGT TGCTCGGCGG TGCGGAAATC TTCGGGCTGG ATCGCTTTGA AGGGGGCGCG
ATGATCGTCA AGGGGCGGTT CAAGACGCGT CCGCAGAAGC AGGCGGATGT GTTGCGGGCC
TTCAACGTTG TGCTCAAGGA TGCGTTCGAC AAGGCGCACG TGCCGCTGGC GGCGCCGGGG
ACGGTGTTGC GGACTTCGGC GGCGTTGGAG GAGTGGATGG CGCGGGTTGG TGGGCCGGAT
GAGCGGAAGG TGCCGCCTAC GGCCGAGCCA CCCGCTGCGG GGGCGCCGGC TTAA
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| Protein sequence | MRTHSLFCTR RLWPLASLLL LLMACVANMA DAAPVSFAKL AGLPTSTASA SAPAADPAQT
RQSLDTVITL LNNDQQRTAL VNELKQLRDG MSAQQKVQAE QAPGLLGAVA SLIENGSLQA
DVEAGAPRYW LRRIEAASGN ASLLVAPEKR MPLLADLAST VGIWAAIAAG LLGLGWLIRR
VFGLTVGLGP HPTTRALLID ALRKIGPWAI SFAVIMRLDH DASPGFVLAL VLAYAIVWGA
IITAGVAMLF SLFSGSAHRR VAVEYLFKHG MWPIFLTASL GACGDALVDP RVALVLGGSL
SLLLATVCNV VSSLMLAVGA LWARRPIGQL IANRPLELRS GEHTGNQIRR LLAAFWPVPV
VVLAGATVMA TLTMPDNVDV VARRAVMTSL LLVAAFFLSA LVRPRANWRA HLRLTRSSPY
LERLKHFVGA LIKLVIWIAF LELVLRVWGH TLVEVTHSSV NGKRIADALV GLIGTVFATW
LVWILLDTAI LRALSPASAR AQPSTRALTI LPLLRNGLKV TLVVTASIGV LANLGVNVTP
LVAGAGVIGL AVGFGAQSLA QDFITGIFIL MEDTISVGDV VDVGVATGSV INLTIRTVRL
RDGTGAVLSI PFSQIKTVRN LSRDYSFADF EVRVAMEAEP QQAIDLVRAA ADQIAGEPRF
GYTLLGGAEI FGLDRFEGGA MIVKGRFKTR PQKQADVLRA FNVVLKDAFD KAHVPLAAPG
TVLRTSAALE EWMARVGGPD ERKVPPTAEP PAAGAPA
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