Gene Rpic_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3316 
SymbolrplJ 
ID6287009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3465772 
End bp3466278 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID642626892 
Product50S ribosomal protein L10 
Protein accessionYP_001900870 
Protein GI187930383 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.354504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACTCA ATCTCGAAGA TAAGAAGGCC GTCGTGGCCG AGGTAACGGC GCAAGTCGCC 
AAGGCCTCGA CCATCGTCGT CGCCGAATAT CGCGGTATCA CGGTTGGCGA TCTGACCAAG
CTGCGCGCGC AAGCGCGCCA GCAAGGCGTC TACCTGCGCG TTCTGAAGAA CACGCTGGCA
CGCCGCGCTG TTGAAGGCAC GCCGTTTGCC GAACTCGCCG AGCAACTGAC CGGCCCGCTG
ATCTACGGTA TTTCCGAAGA CGCAGTGGCC CCGGCCAAGG TGCTGAACGA TTTCGCCAAG
GGCAATGACA AGCTGGTGCT GCGCGCTGGT TCGTACGATG GCAAGGTTCT CGACGTCGAC
GCCGTGAAGG CGCTGGCAAC GATTCCGAGC CGCGAAGAAC TGCTCAGCAA GCTGCTGTTC
GTCATGCAGG CGCCGGTGTC GGGCTTTGCC CGCGCCCTGG GTGCCCTGGC TGCCAAGCAA
GGCGAAGGCG AGGCTGCAGC GGCCTAA
 
Protein sequence
MALNLEDKKA VVAEVTAQVA KASTIVVAEY RGITVGDLTK LRAQARQQGV YLRVLKNTLA 
RRAVEGTPFA ELAEQLTGPL IYGISEDAVA PAKVLNDFAK GNDKLVLRAG SYDGKVLDVD
AVKALATIPS REELLSKLLF VMQAPVSGFA RALGALAAKQ GEGEAAAA