| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3176 |
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| Symbol | |
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| ID | 6286759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3330252 |
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| End bp | 3331763 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642626751 |
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| Product | N-6 DNA methylase |
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| Protein accession | YP_001900730 |
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| Protein GI | 187930243 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
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| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00238415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000309055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTCGTA TCAGTCAACA AGAACTCGAA AGCTACCTCT GGCGTGCTGC CGTTTTGCTG
CGAGGGCTGA TCGACGCTGG CGACTACAAG CAGTTCATCT TTCCGCTGCT GTTCTTCAAG
CGCGTGTCGG ACGTGTGGGA CGAGGAGTAT CAGTCCGCTT TGGTGGAGTC GGACGGCGAC
CTGTCCTACG CGCAGTTCGC CGAGAACCAC CGCTTTCAGA TCCCTGAGGG GGTGCACTGG
AACGATGTGC GGCAAACGCC GAAGAACGTT GGCAGCGCCA TCCAGAAGGC CATGCGGGCC
ATCGAGTTGG CTAACCCTGA CATGCTCGAC GGCATTTTTG GAGATGCGTC GTGGACCAAC
CGCGAGCGTC TTCCGGATGA AACGCTGAAG GACCTGATCG AGCACTTCTC AACTCAGACG
CTGTCGGTGG CCAACGTCCC CGAGGATGAA CTTGGTAACG CCTACGAGTA CCTGATCAAG
AAGTTTGCGG ATGACTCTGG TCACACGGCA GCGGAGTTCT ACACCAACCG CACCGTCGTC
CACTTAATGA CGCAACTCTT GGCACCGCTA GCGGGCGAGT CGATCTACGA CCCCACGTGT
GGCACCGGCG GCATGTTGAT CTCGGCGTTG GACGAGGTGA AGCGTTCGGG CGGCGAGTAC
CGCACCCTCA CGCTCTACGG CCAAGAGCGC AACCTTATCA CCTCCTCCAT CGCGAGAATG
AACCTGTTCC TCCACGGCGT AGTGGACTTC GAGATCATCC GCGGCGACAC CTTGGCCGAA
CCCAAGCACA TCGAAGGCGA CCGCCTGCGC CAGTTCGATG TGATCCTGGC CAACCCACCG
TACTCGATTA AGCAATGGGA TCGCGAGGCG TGGAGCAGTG ACAAGTGGGG GCGCAACACC
TTAGGCACGC CGCCGCAGGG TCGCGCCGAT TACGCCTTTC ATCAACACAT CCTGACCAGC
CTCACTACCA AGGGCCGCTG TGCAGTGCTG TGGCCACACG GCGTTTTGTT CCGTAACGAG
GAACAAGCCA TGCGCGCAAA GATGGTCGAG CAGGATTGGG TGGAGGCTGT GATTGGCTTG
GGACCCAACC TGTTCTACAA CTCCCCGATG GAGTCATGCG TCGTCATCTG CAACCGCCGG
AAGACGTCTG AACGCAAGGG CAAGGTGATC TTCATTGACG CGGTTAACGA AGTGACCCGC
GAGCGCGCTC AAAGCTTCCT CAAGCCTGAG CACCAACGGC GCATCTTGGC TGCCTACGAA
GTGTTTGCGG ACGAGCCTGG CTTCGCCAAG GTCGCCACGC TGGCCGAGAT TGGCGGCAAC
GGGGGCAACC TATCGATCCC GCTTTACGTG AAGCGCATTG CCGCAGTGGT CGCCACTGAC
AGCAATGGCG ATGCGGTATC ACTCCGCTCT GCCTGGGATA AATGGCAAAC GGATGGGCGC
ACCTTCTGGC AACAGATGGA CACGTTGGTG GAAACGCTGG ATGGGCTTTC CAAGGCTGAG
GATATGCAAT GA
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| Protein sequence | MSRISQQELE SYLWRAAVLL RGLIDAGDYK QFIFPLLFFK RVSDVWDEEY QSALVESDGD
LSYAQFAENH RFQIPEGVHW NDVRQTPKNV GSAIQKAMRA IELANPDMLD GIFGDASWTN
RERLPDETLK DLIEHFSTQT LSVANVPEDE LGNAYEYLIK KFADDSGHTA AEFYTNRTVV
HLMTQLLAPL AGESIYDPTC GTGGMLISAL DEVKRSGGEY RTLTLYGQER NLITSSIARM
NLFLHGVVDF EIIRGDTLAE PKHIEGDRLR QFDVILANPP YSIKQWDREA WSSDKWGRNT
LGTPPQGRAD YAFHQHILTS LTTKGRCAVL WPHGVLFRNE EQAMRAKMVE QDWVEAVIGL
GPNLFYNSPM ESCVVICNRR KTSERKGKVI FIDAVNEVTR ERAQSFLKPE HQRRILAAYE
VFADEPGFAK VATLAEIGGN GGNLSIPLYV KRIAAVVATD SNGDAVSLRS AWDKWQTDGR
TFWQQMDTLV ETLDGLSKAE DMQ
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