Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3170 |
Symbol | |
ID | 6288845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3320844 |
End bp | 3321974 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642626745 |
Product | XRE family plasmid maintenance system antidote protein |
Protein accession | YP_001900724 |
Protein GI | 187930237 |
COG category | [R] General function prediction only |
COG ID | [COG3093] Plasmid maintenance system antidote protein |
TIGRFAM ID | [TIGR02607] addiction module antidote protein, HigA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.19493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000213391 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGGTGCAC GTATTCCGGC CGAGGTCTTT CCTCCCGGGG AATTTTTGAA GGACGAGCTT GAGGCTCGTG GGTGGACGCA GGCCGAGTTC GCCGAAATTA TTGGTAAGGA CGCACGCCTG GTCAGTGAAG TGATCAGCGG CAAGCGTTCT ATTACTCCGG AAACAGCCAT CGCGCTGGGG GCAGCGCTCG GCAGTTCGCC GGAGCTTTGG ATGAATCTGG AGGGTCAATA CCAACTATCA AAGGTCCGAC CGAAAGAAGA CTCTATCGCA CGCAAGGCAG ACTTGCATGG CCGGTTCCCC GTTCGCGAGA TGGTTAAACG GGGTTGGATT GAAGCGACCA AGAGTGTCGA TGTACTACAG CAGCAACTAA TTGAGTTCTT CGGCATTGAT GAGATCGAGC AGACTCCTCA ACTTCGCTAC GCGGCCAAAG CCACAACGTA CCATGAGGTC CCTGTAGCGC AGGTGGCATG GTTCTGCCGA GCGAGAAAGT TGGCAGCATA TTCGCCTACC GCTGCCAGCT TCAATTCTCA ACGACTGGCG GCAGCGAAAG TTCAACTCAG CGAGCAACTG GCCCACACGG ACGGCACACA ACGAGTGCCG GGAATTCTGG CGCAGGCCGG AATTCGATTC GTGATTGTTG AGGCTATTGC AGGCTCGAAG ATCGACGGCG CATGTTTCTG GCTAGACAAA AAGAATCCTG TCGTCGCGAT GTCGATGAGG TTTGATCGGG TCGACAACTT CTGGCACACC CTCCTTCATG AGTTGGATCA CGTGGAGCAT GAGGAGGGAC AGTCTGCACC TATCCTCGAC GTAGACATCA TGGATGCCGA CTCAGGCAAG CCGGACATTG AAGCAAGGGC GAATGAAAAC GCGGCTGAAG CGCTCATTCC CAAGCGGGAA ATGGACGGCT TTATTGCAAG GGTCAATCCA ATGTTTAGCG AGGAGCAGAT CGTTGGTTTT GCTCGGCGTA TCGCCGTACA TCCGGGCCTC GTTGTAGGTC AGCTCCAGAA TCGAGGCTTG ATTCCCTGGA GCTTCCATCG GAAGCACTTG GAGAAGGTCC GAGAGTACGT TGTAGCGAAT GCTATTACCG ACGGATTTGG TCATCGTGTG ATCGAATCAG CATCGATGTG A
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Protein sequence | MGARIPAEVF PPGEFLKDEL EARGWTQAEF AEIIGKDARL VSEVISGKRS ITPETAIALG AALGSSPELW MNLEGQYQLS KVRPKEDSIA RKADLHGRFP VREMVKRGWI EATKSVDVLQ QQLIEFFGID EIEQTPQLRY AAKATTYHEV PVAQVAWFCR ARKLAAYSPT AASFNSQRLA AAKVQLSEQL AHTDGTQRVP GILAQAGIRF VIVEAIAGSK IDGACFWLDK KNPVVAMSMR FDRVDNFWHT LLHELDHVEH EEGQSAPILD VDIMDADSGK PDIEARANEN AAEALIPKRE MDGFIARVNP MFSEEQIVGF ARRIAVHPGL VVGQLQNRGL IPWSFHRKHL EKVREYVVAN AITDGFGHRV IESASM
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