Gene Rpic_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2970 
Symbol 
ID6287470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3093924 
End bp3094286 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content61% 
IMG OID642626540 
Productaspartate alpha-decarboxylase 
Protein accessionYP_001900525 
Protein GI187930038 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA ACATGCTTCG CGCCAAGCTG CACCGCGCGA CGGTCACCCA GGCCGATCTC 
GACTACGAAG GCTCCTGCGG CATCGACGAG GACCTCCTCG ATGCCGCCGA CATGCGCGAA
TACGAAAAGA TCGAGCTGTA CAACGTCAAC AACGGCGAAC GCTTCTCGAC CTACATCATC
AAGGGCAAAC GCGGCTCGGG CGAAATCTCG CTCAACGGCG CCGCCGCACG CCGCGCCCAC
GTGGGCGACC TGCTGATCAT CTGCACTTAC GCGCCGATGA ACGAAGAAGA AGTCGCCAGC
TACAAGCCCA AAGTCGTGCT GCTGGGCGAG GGCAACAAGA TCAAGGCCAT CAAGGAAACC
TGA
 
Protein sequence
MQRNMLRAKL HRATVTQADL DYEGSCGIDE DLLDAADMRE YEKIELYNVN NGERFSTYII 
KGKRGSGEIS LNGAAARRAH VGDLLIICTY APMNEEEVAS YKPKVVLLGE GNKIKAIKET