Gene Rpic_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2890 
Symbol 
ID6288523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2996116 
End bp2997759 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content67% 
IMG OID642626460 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001900445 
Protein GI187929958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCT CCCTCTTCCG GTTGAAGTCT TGGCTCCGCG CAGGCGCCAG CCTTGCCTGT 
GTTGCCTGGG TGGCGAGCAG CCAATTCGCC ACAGCTGCCA CACCGCAGCC GCAATACACC
GGTGACCTGA TCATCAAATG GCGCGACGAC ACGAGCGGCA CGCGCAAGAC GCTCTCGGCC
AGCGAGGCGA GCAACCGCTT GCTGTCGGTC GCGCAGGCCG CGGGTAGCAC GCTGCAGGTC
AAGCGCACGC TGGCCACCAA CGCGCAACTC ATGCGCACCG GCCTGACCGA CGCCGCGAGC
ATCCAGGCCA CCGTCGACAA GATCGCGCAG GACGCCCGCG TGGCCTATGT GGTGCCCGAT
CGCATCCTGC GGCCCAACAC CGTTCCGAAC GATCCGCTGT TCGCCACGCA GAACAACCTG
GCCGCGCCGG CGCTGGTGCC GGGCGGCATC AACGCGGCCG CGGCATGGAG CATCACGCAG
GGCTCGACGG GCATCGTGGT GGCGGTGGTC GATACCGGCT ACACCGATCA CCCCGATCTG
TCCCCCAAGA TCCTGCCGGG CTACAACTTC ATCTCGGACC CGGCGCGCGC GGGTAACTCC
TTTGGCCGAG GAACGGACGC GCACGACCTA GGCGACATCG TTACGTCAGC TGACGTTCCC
AAGATTTCCG GCTGCACGAC CAATGACATT AGCAATCCGC CTGCAAGTAG CTGGCACGGC
ACCGAGGTCA GCAGCGTGCT CGCCGCCCAG ACAAACAATG CGCTCGATAT CGCGGGGGTC
GGCTGGAACA CGCCGATCGT GCCGGTACGC GTGTCGGGCA AGTGCGGTGC GCTGCTGTCG
GACACGGTCG ACGGCATGTT GTGGGCGGGC GGCATCAACG TGTCTGGCGT GCCGGCCAAC
GCCAACCCGG CGCGTGTTGT GAACGTGAGC CTGGGCAGCG TTGGCCAATG TTCGGCCGCA
GAACAAGACG CAGTGAATCA GTTGGCCGCA CGCGGCACCA TCGTCGTAGC TGCTGCCGGC
AACGAAGCCG CGCAGACCGT TGACGCACCG GCCAATTGCT CAGGAGCGAT CGCCGTCACC
GCGCACGTCG ACAGCGGCGA GAACGCCAGC TACGCGAACG TGGGGCCGCA GGTGGCGCTG
TCCGCGCCGG GGGGTGGCTG CGGCAACTCG AAGGTCGTAA CAACGACAAA TCCCGCGACT
TGTGCGGAGC CCGTTTCCGT CATCCAGGCC GACTCCAACG ATGGCACACA AAGCGTCGGC
AACCCCACGG TCAAGTCGGT GGCAGGTACA AGTTTCTCGA CACCGGAAAC CGCCGGCACT
ATCGCGCTGA TGCTTAGCGT GCAACCCCAG TTGTCGAACG CGCAGATATT GGCTGGCCTG
AAGCAGACCG CGCGGCCGCA CCCGAGCGGC ACGTTTTGCG CCGTAAACAC CGGCATCTGC
GGCGCAGGCC TGCTGGATAC CGCCGGTGCC GTCGGCTATG CCCAGAACAC GGCCCCGGCT
GGCGCGGGCA GTGGCACGAC GGGGTCGGGG GGATCGACCG GGGGTACTAG CAGCGGTGGC
GGTGGTGCCA TTCCGCTGGC CGGTGCCGCC CTGCTGCTGG CGGCTGGCAT GGCCGGTGGT
CGCCGTCGCC TAAAGGCGCC TTAA
 
Protein sequence
MTPSLFRLKS WLRAGASLAC VAWVASSQFA TAATPQPQYT GDLIIKWRDD TSGTRKTLSA 
SEASNRLLSV AQAAGSTLQV KRTLATNAQL MRTGLTDAAS IQATVDKIAQ DARVAYVVPD
RILRPNTVPN DPLFATQNNL AAPALVPGGI NAAAAWSITQ GSTGIVVAVV DTGYTDHPDL
SPKILPGYNF ISDPARAGNS FGRGTDAHDL GDIVTSADVP KISGCTTNDI SNPPASSWHG
TEVSSVLAAQ TNNALDIAGV GWNTPIVPVR VSGKCGALLS DTVDGMLWAG GINVSGVPAN
ANPARVVNVS LGSVGQCSAA EQDAVNQLAA RGTIVVAAAG NEAAQTVDAP ANCSGAIAVT
AHVDSGENAS YANVGPQVAL SAPGGGCGNS KVVTTTNPAT CAEPVSVIQA DSNDGTQSVG
NPTVKSVAGT SFSTPETAGT IALMLSVQPQ LSNAQILAGL KQTARPHPSG TFCAVNTGIC
GAGLLDTAGA VGYAQNTAPA GAGSGTTGSG GSTGGTSSGG GGAIPLAGAA LLLAAGMAGG
RRRLKAP