Gene Rpic_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2840 
Symbol 
ID6288596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2948388 
End bp2949044 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID642626410 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001900395 
Protein GI187929908 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG GCGATCTGTT TGGCGACCAC CCACCCGCTG ACGACACACG CATTGCGCTC 
GGCGAAGCGG CGTTTGTGCT GCGCGGCTTT GCGCTGTCGG AAGCGCCGGC CCTGATCGCG
GCGGTGGATG CCATCGCGCA GCAGGCCGCG TTTCGGCACA TGGTCACGCC GGGCGGCTTT
GAGATGTCAG TCGCGCTCAC CAACAGCGGC GCGCTGGGCT GGACATCAGA CCGCCGCGGC
TACCGCTATG CCACGCACGA CCCGCTCACG GAAGCCGCGT GGCCGCCGCT GCCCGATGTG
TTCCTGCGTT TAGCGCACAG CGCGGCCGCC GAAGCAGGCT TCCACGGCTT CACGCCAGAC
GCCTGCCTCA TCAACCGCTA TGTGCCGGGC GCGCGCATGT CGCTGCATCA GGACAAAGAC
GAGCAGGACT ACGGCGCGCC GATCGTCTCA GTGTCACTCG GAATGCCGGC GGTCTTTCTG
TTTGGCGGAC ATCGCCGCGC CGACAGACCG CAACGCATTC CCCTGTTTCA CGGTGATGTC
GTCGTCTGGG GTGGCCCGGA TCGCCTGCGC TATCACGGGA TTGCACCGCT CAAGGACCAC
CCGCACGCAA TGCTGGGCAG CCAGCGCATC AACCTCACGT TCCGCAAGGC CGGCTGA
 
Protein sequence
MTTGDLFGDH PPADDTRIAL GEAAFVLRGF ALSEAPALIA AVDAIAQQAA FRHMVTPGGF 
EMSVALTNSG ALGWTSDRRG YRYATHDPLT EAAWPPLPDV FLRLAHSAAA EAGFHGFTPD
ACLINRYVPG ARMSLHQDKD EQDYGAPIVS VSLGMPAVFL FGGHRRADRP QRIPLFHGDV
VVWGGPDRLR YHGIAPLKDH PHAMLGSQRI NLTFRKAG