| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2760 |
|---|
| Symbol | |
|---|
| ID | 6286942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2871483 |
|---|
| End bp | 2872448 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626331 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001900316 |
|---|
| Protein GI | 187929829 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.436538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTGC GCCAGATCGA AGTCTTCCGC GCCGTGATGC TGGTCGGGAC CGTCAGCGAG
GCGGCGCGCA TGCTGAACGT GTCGCAACCC GTGGTGACGC GCGTGCTGCA GCACACCGAG
CTGCAACTCG GTTTCCGCCT GTTCGACCGC ACCAAGGGCC GCCTGCAGCC CACCGCCGAG
GCGTTCGAAC TGTTCAGCGA AGTCGAGCGG CTGTACCAGG AGGTCGAGCG CGTGCGGCGC
GTGTCGGCCA ACTTGCGCCA CAAGGGGGCG GGGCGCTTGC GCGTGGCGGC TACGCCCAGC
CTGGCGCCGA GCATTCTCGC GCCCGCCGTG CGGCGTTTCT CGCAGCGGCA TCCCGATACG
CTGGTGCGTG TGTTCACGCA CCACACCGCC GAGATCGTGC AGGGCTTACT CTCGCAGGAC
ATCGACGTCG GTTTCGCCTT TGCGCCGCCC GTGCATCCGG CCATCAGCAC CAAGCCGGTG
GCGCAGGGGC GCATCCTGCT GGCCGCGCCG CGCGCCTGGG TGAGCGGCAA GACCGATGGG
CGCGCGCTGC ACAAGCTCGT TGCCGAGAAG CCTTTCATCG GATTGGAAGA CCAGATCTCG
CTTGGCTCGC TGGTCGGGCA GACATTGGCG CGCGGCGGGC TGGCGCCGCA GTCGACGTTG
GAAGTGCAGA CATATTCGTT GGCGCGTTCG CTGGTAGAGG AGTCGCTCGG CGTGACGATG
CTCGATCAGT TCACAGCCGC CACCGGCAGC ATGGAGCGCA TCGCGCTGTT CGCGCTGGAG
CCGGCGCAGA CGTTTGATGT GCGTGCCATG CGTGCCGAGC ATCACGCGCC GTCATCGTTG
GCCGATAGCC TGGTGCAGTG CTTTGCCGAG GCCGCGCGTG CGCTGTCCGA TGAACTCCCG
CAGCGCGTCG AGCCGACAGC ATTCGTGCTC AAGCCCACCG AACCTGACAG CGACGCGGCG
GACTAA
|
|---|
| Protein sequence | MRLRQIEVFR AVMLVGTVSE AARMLNVSQP VVTRVLQHTE LQLGFRLFDR TKGRLQPTAE
AFELFSEVER LYQEVERVRR VSANLRHKGA GRLRVAATPS LAPSILAPAV RRFSQRHPDT
LVRVFTHHTA EIVQGLLSQD IDVGFAFAPP VHPAISTKPV AQGRILLAAP RAWVSGKTDG
RALHKLVAEK PFIGLEDQIS LGSLVGQTLA RGGLAPQSTL EVQTYSLARS LVEESLGVTM
LDQFTAATGS MERIALFALE PAQTFDVRAM RAEHHAPSSL ADSLVQCFAE AARALSDELP
QRVEPTAFVL KPTEPDSDAA D
|
|---|
| |