| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2658 |
|---|
| Symbol | cobD |
|---|
| ID | 6288276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2772185 |
|---|
| End bp | 2773165 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626229 |
|---|
| Product | cobalamin biosynthesis protein |
|---|
| Protein accession | YP_001900216 |
|---|
| Protein GI | 187929729 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.869405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTTGC CGTCGGGCGG CGTGTTCGAT CTCGGGTGGC CCCTCGTGAC GCTGGCAGCA
CTCGCGGGCG TGCTGCTCGA TCAGGTATTC GGCGAGGTGT CGCGCTGGCA TCCTTTGGTC
GGCTTCGGGC GCATCGCCGC AGCGATTGAG CGCTGCATGA ACCGCGCACC GGCTGCGTTG
GCCAGGTCGC GCATCGTCGG TCTCGTCGCT TGGGCAGTCG CCGTGTTGCC GTTCGTGCTG
CTGGCGGCAT GGCTCGTCGT GATGGCGGGC GATGTGTCGC CACGGCTGGT GGTGGCGCTT
GATGCGATCG CCCTCTATTT CGCCATTGGC GCGCGCAGCC TGTATGAACA CATTGCGCCG
ATCGCGCTTG CGTTGCGCGA TGCGGATTTG CCCCGCGCAC GCGCCCTCGC CTCGCGCATC
GTCTCGCGTG ATCTCACACA AGCCGGCGAC GAGCCCATTG CGCGTGCCGC CGTGGAATCG
GCGCTGGAGA ACGGCAGCGA TGCCGTCTTC GCGCCGCTGT TCTGGCTTGT TGTGGCCGGC
GCGCCCGGCG TGATGCTGTA CCGGCTGGCC AACACGCTCG ATGCAATGTG GGGCTACCGC
AATGCGCGCT TTACCGGCTT TGGATGGGCA GCCGCACGCA TCGACGACGT GCTCAACTGG
ATTCCCGCGC GACTCACGGC GATGAACTAC GCGCTGCTTG GCCACACCGC CGATGCGCTG
CGCTGCTGGC GCACGCAAGC CCCGCAATGG TCGAGCCCGA ACGCGGGCCC GGTCATGGCC
GCCGGCGCGG GCAGCCTGCG CGTCCGGCTT GGCGGCGCAG CACGCTACGA AGGCGTGGAA
GAAGCGCGCC CGCCGCTCGG CACCGGCAAG CCGGCAACCG CTGTCGATAT CACGCGTGCG
TTGACGCTCG TATCGCGCAC GTTGTGGCTG TGGCTCGGCG TACTTGGCCT GATCGCAACA
TCGGCGTGGG GCTTGTCATG A
|
|---|
| Protein sequence | MSLPSGGVFD LGWPLVTLAA LAGVLLDQVF GEVSRWHPLV GFGRIAAAIE RCMNRAPAAL
ARSRIVGLVA WAVAVLPFVL LAAWLVVMAG DVSPRLVVAL DAIALYFAIG ARSLYEHIAP
IALALRDADL PRARALASRI VSRDLTQAGD EPIARAAVES ALENGSDAVF APLFWLVVAG
APGVMLYRLA NTLDAMWGYR NARFTGFGWA AARIDDVLNW IPARLTAMNY ALLGHTADAL
RCWRTQAPQW SSPNAGPVMA AGAGSLRVRL GGAARYEGVE EARPPLGTGK PATAVDITRA
LTLVSRTLWL WLGVLGLIAT SAWGLS
|
|---|
| |