Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2522 |
Symbol | |
ID | 6287236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2636743 |
End bp | 2637204 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642626095 |
Product | Integrase catalytic region |
Protein accession | YP_001900083 |
Protein GI | 187929596 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.898977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.732387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCTGC GCCCGGAATA TCCACATCAC GTCTGGAGCT ACGACTTCGT GCACCACACT ACCGAAGACG GCCGCAGCCT GCGGCTGATG ACGCTCGTCG ACGAGTTCTC GCGCCAGTGC CTGGCCATCA AGGTAGGACG ACGCTTGAAC AGTATGGACG TCATCGAGAC ACTGGCTGAC GCCATGCTGG CACATGGCAT CCCCGAGCAT GCGCGCTCGG ACAACGGTGC GGAGATGACA GCGAACATCG TGCGTGACTG GCTGGGCCGT TTGGGCGCGA AGACGCTGTT CATCGCACCC GACAGCCCGT GGGAAAATGG CTACTGCGAG TCCTTCAACG GCAAGCTGCG CGATGAGCTG CTCAACGGCG AACTGTTCTA CAGCCTCAAG GAAGCGCAGG TCGTCATTGA ACAATGGCGC CAACACTACA ACACGCAGCG CCCGCATTCG TCGCTTGGAT AA
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Protein sequence | MRLRPEYPHH VWSYDFVHHT TEDGRSLRLM TLVDEFSRQC LAIKVGRRLN SMDVIETLAD AMLAHGIPEH ARSDNGAEMT ANIVRDWLGR LGAKTLFIAP DSPWENGYCE SFNGKLRDEL LNGELFYSLK EAQVVIEQWR QHYNTQRPHS SLG
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