Gene Rpic_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2522 
Symbol 
ID6287236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2636743 
End bp2637204 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID642626095 
ProductIntegrase catalytic region 
Protein accessionYP_001900083 
Protein GI187929596 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.898977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.732387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTGC GCCCGGAATA TCCACATCAC GTCTGGAGCT ACGACTTCGT GCACCACACT 
ACCGAAGACG GCCGCAGCCT GCGGCTGATG ACGCTCGTCG ACGAGTTCTC GCGCCAGTGC
CTGGCCATCA AGGTAGGACG ACGCTTGAAC AGTATGGACG TCATCGAGAC ACTGGCTGAC
GCCATGCTGG CACATGGCAT CCCCGAGCAT GCGCGCTCGG ACAACGGTGC GGAGATGACA
GCGAACATCG TGCGTGACTG GCTGGGCCGT TTGGGCGCGA AGACGCTGTT CATCGCACCC
GACAGCCCGT GGGAAAATGG CTACTGCGAG TCCTTCAACG GCAAGCTGCG CGATGAGCTG
CTCAACGGCG AACTGTTCTA CAGCCTCAAG GAAGCGCAGG TCGTCATTGA ACAATGGCGC
CAACACTACA ACACGCAGCG CCCGCATTCG TCGCTTGGAT AA
 
Protein sequence
MRLRPEYPHH VWSYDFVHHT TEDGRSLRLM TLVDEFSRQC LAIKVGRRLN SMDVIETLAD 
AMLAHGIPEH ARSDNGAEMT ANIVRDWLGR LGAKTLFIAP DSPWENGYCE SFNGKLRDEL
LNGELFYSLK EAQVVIEQWR QHYNTQRPHS SLG