Gene Rpic_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2508 
Symbol 
ID6287262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2623825 
End bp2624367 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID642626084 
ProductHemerythrin HHE cation binding domain protein 
Protein accessionYP_001900072 
Protein GI187929585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.351618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.60219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTAG ATGGCCTACT GACCAAACCA ACGCCTTCTT TCGACGAGCC GCTCGAAATG 
CTCAAGGCGT GTCACGAGCG TATTGCCGCG CAGTGCGCCA CGCTCGCAAA ACTGTCTGCA
CACCTGCCAT CGCACGGTGC GGACGAGCAG GCGCGGCAGG CGGCCCGAAA CATCATGCGC
TACTTCGACG TGGCCGGGCC TCATCATCAT GCCGACGAAG AAGAGGATCT CTTTCCGTTG
CTGATGGTAG AGGGCCAGCG CCTGCGTTCA CCGGTGGTCG AGGTGATCGC GTCGCTGCTC
GATGAGCATC GATCTCTGGA AGCAAGCTGG GCGCAGTTGC GAGCAGTCCT TGCCGATATC
GCCCAAGGCC AGGTCCGGCC GATCGAGCGC GCCTGGACGG ACAGCTTTGC TGACGCATAC
CGCCGTCACA TCGCCGTCGA AGAAGACCAG GTTCTGGTGT TCGCCCAAGC GTGCCTAGAT
CGGCAGCAAC TCGCAAGGCT GAGCGCAGCG ATGGTTGCTC GACGCGCTGT GGCATCGCAC
TGA
 
Protein sequence
MKLDGLLTKP TPSFDEPLEM LKACHERIAA QCATLAKLSA HLPSHGADEQ ARQAARNIMR 
YFDVAGPHHH ADEEEDLFPL LMVEGQRLRS PVVEVIASLL DEHRSLEASW AQLRAVLADI
AQGQVRPIER AWTDSFADAY RRHIAVEEDQ VLVFAQACLD RQQLARLSAA MVARRAVASH