Gene Rpic_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2492 
Symbol 
ID6289641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2605141 
End bp2606343 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID642626068 
Productpyrroloquinoline quinone biosynthesis protein PqqE 
Protein accessionYP_001900056 
Protein GI187929569 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR02109] coenzyme PQQ biosynthesis protein E 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.250234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0827229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCGA ACGCGGCTGG CTCGTTTGAG GCCGATTCGC TGCTCGCGCC GGCAGCTACG 
CCGATGCCCG GTCCGCCGCT CTGGCTACTG GCCGAGCTGA CCTATCGCTG CCCGCTGCAT
TGCGCCTTCT GCTCCAACCC GGTCGACTAC ACGCGGCACG ATCAGGAACT CTCCACCGAA
CAGTGGTGCG ATGTGTTCAC CCAGGCGCGG GCGCTGGGCG CGGTGCAGCT GGGCCTGTCG
GGCGGCGAGC CGCTGTTGCG CAAGGATCTT GAAACCCTGG TCGCGCATGC GCATGGGCTC
GGGTTCTACG TGAACCTCGT GACATCTGGG GTGGGCCTGA CCGATGCGCG GCTTGGCGCA
TTGCGCGCTG CGGGGCTCGA CCATATCCAG CTGTCGTTCC AGGACTCCAC GCGGGAGCTG
AACGACTTTC TGTCGAGCAC GCGCACATTT GACCTGAAGC GCCAGGTGGC GGATCTGATC
AAGGCCCACG GTTATCCGAT GGTGATGAAC TGCGTGATGC ACCGGCATAA CCTGCCGCAC
GTGGGCGCCA TCATCGACAT GGCGCTGGAG ATCGGCGCCG AATACCTGGA ACTTGCCAAC
ACGCAGTACT ACGGCTGGGC ATGGGAAAAC CGCCTGGCGC TGATGCCCAC CCTGGAGCAA
CTACGTGACG CCGAAGCCGT CGTGAACGAC TACCGGACCC GCATCGGCAG CCGATGCCAA
TTGCTTTACG TCGTGCCGGA CTACTTTGAG CAGCGCCCGA AGAAGTGCAT GAACGGCTGG
GGCACGACAT TCCTCGGCAT CGCGCCGGAT GGCGTTGCGC TGCCCTGCCA CTCGGCGCGC
ATGCTGCCGG GGCTGGAGCT ACCCAACGTG CTCAGCCAGC CGCTGCGCGA CATCTGGCGA
AGCAGCGATG CCTTTCAACG CTTTCGCGGC ACGCATTGGA TGCCGGAGCC ATGCCAGTCA
TGCGAATCGC GCGAGGAAGA TGCCGGCGGC TGCCGCTGTC AGGCGTACCT GTTGACGGGC
GATGCGACAC GCACGGACCC GGTATGTGGA AAGTCGGCAG ATCACGGCGC GCTGCAGCAG
GTGGTGCTGC AAGGTCGGAT GGCTGCGATG AACGGGTTCG GGCAGATGCG GGACACGCGC
ACCGGTGAAG TGCCGATCGT GTTCCGGACG GACGCCAATT CGCGCCGGCT CACGCAACCA
TAG
 
Protein sequence
MHSNAAGSFE ADSLLAPAAT PMPGPPLWLL AELTYRCPLH CAFCSNPVDY TRHDQELSTE 
QWCDVFTQAR ALGAVQLGLS GGEPLLRKDL ETLVAHAHGL GFYVNLVTSG VGLTDARLGA
LRAAGLDHIQ LSFQDSTREL NDFLSSTRTF DLKRQVADLI KAHGYPMVMN CVMHRHNLPH
VGAIIDMALE IGAEYLELAN TQYYGWAWEN RLALMPTLEQ LRDAEAVVND YRTRIGSRCQ
LLYVVPDYFE QRPKKCMNGW GTTFLGIAPD GVALPCHSAR MLPGLELPNV LSQPLRDIWR
SSDAFQRFRG THWMPEPCQS CESREEDAGG CRCQAYLLTG DATRTDPVCG KSADHGALQQ
VVLQGRMAAM NGFGQMRDTR TGEVPIVFRT DANSRRLTQP