| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2492 |
|---|
| Symbol | |
|---|
| ID | 6289641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2605141 |
|---|
| End bp | 2606343 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626068 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
|---|
| Protein accession | YP_001900056 |
|---|
| Protein GI | 187929569 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.250234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0827229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTCGA ACGCGGCTGG CTCGTTTGAG GCCGATTCGC TGCTCGCGCC GGCAGCTACG
CCGATGCCCG GTCCGCCGCT CTGGCTACTG GCCGAGCTGA CCTATCGCTG CCCGCTGCAT
TGCGCCTTCT GCTCCAACCC GGTCGACTAC ACGCGGCACG ATCAGGAACT CTCCACCGAA
CAGTGGTGCG ATGTGTTCAC CCAGGCGCGG GCGCTGGGCG CGGTGCAGCT GGGCCTGTCG
GGCGGCGAGC CGCTGTTGCG CAAGGATCTT GAAACCCTGG TCGCGCATGC GCATGGGCTC
GGGTTCTACG TGAACCTCGT GACATCTGGG GTGGGCCTGA CCGATGCGCG GCTTGGCGCA
TTGCGCGCTG CGGGGCTCGA CCATATCCAG CTGTCGTTCC AGGACTCCAC GCGGGAGCTG
AACGACTTTC TGTCGAGCAC GCGCACATTT GACCTGAAGC GCCAGGTGGC GGATCTGATC
AAGGCCCACG GTTATCCGAT GGTGATGAAC TGCGTGATGC ACCGGCATAA CCTGCCGCAC
GTGGGCGCCA TCATCGACAT GGCGCTGGAG ATCGGCGCCG AATACCTGGA ACTTGCCAAC
ACGCAGTACT ACGGCTGGGC ATGGGAAAAC CGCCTGGCGC TGATGCCCAC CCTGGAGCAA
CTACGTGACG CCGAAGCCGT CGTGAACGAC TACCGGACCC GCATCGGCAG CCGATGCCAA
TTGCTTTACG TCGTGCCGGA CTACTTTGAG CAGCGCCCGA AGAAGTGCAT GAACGGCTGG
GGCACGACAT TCCTCGGCAT CGCGCCGGAT GGCGTTGCGC TGCCCTGCCA CTCGGCGCGC
ATGCTGCCGG GGCTGGAGCT ACCCAACGTG CTCAGCCAGC CGCTGCGCGA CATCTGGCGA
AGCAGCGATG CCTTTCAACG CTTTCGCGGC ACGCATTGGA TGCCGGAGCC ATGCCAGTCA
TGCGAATCGC GCGAGGAAGA TGCCGGCGGC TGCCGCTGTC AGGCGTACCT GTTGACGGGC
GATGCGACAC GCACGGACCC GGTATGTGGA AAGTCGGCAG ATCACGGCGC GCTGCAGCAG
GTGGTGCTGC AAGGTCGGAT GGCTGCGATG AACGGGTTCG GGCAGATGCG GGACACGCGC
ACCGGTGAAG TGCCGATCGT GTTCCGGACG GACGCCAATT CGCGCCGGCT CACGCAACCA
TAG
|
|---|
| Protein sequence | MHSNAAGSFE ADSLLAPAAT PMPGPPLWLL AELTYRCPLH CAFCSNPVDY TRHDQELSTE
QWCDVFTQAR ALGAVQLGLS GGEPLLRKDL ETLVAHAHGL GFYVNLVTSG VGLTDARLGA
LRAAGLDHIQ LSFQDSTREL NDFLSSTRTF DLKRQVADLI KAHGYPMVMN CVMHRHNLPH
VGAIIDMALE IGAEYLELAN TQYYGWAWEN RLALMPTLEQ LRDAEAVVND YRTRIGSRCQ
LLYVVPDYFE QRPKKCMNGW GTTFLGIAPD GVALPCHSAR MLPGLELPNV LSQPLRDIWR
SSDAFQRFRG THWMPEPCQS CESREEDAGG CRCQAYLLTG DATRTDPVCG KSADHGALQQ
VVLQGRMAAM NGFGQMRDTR TGEVPIVFRT DANSRRLTQP
|
|---|
| |