Gene Rpic_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2462 
Symbol 
ID6289754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2571998 
End bp2572843 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID642626040 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001900028 
Protein GI187929541 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA GCCGACGTCT GACGCAATTT GCAGGGGCCG CCATCCTGGC CGCAGCAACC 
CTGGCCGCCA CCACCGCGCA CGCTGATCAA GTTTCCGACA TCAAGAAGAA GGGCGAACTT
GTCTGCGGCG TGCTCGGCAC CGACGAGCCG TTCAGCTTCC TGAAGGACCC GATGAGCCGC
GAGATCGTCG GCTATGACGT CGACATGTGC GACGCCATCG CCAAGAGCCT GGGCGTCAAG
CCCGTGCTCA AGCAACTGGC CGTGGCGGCG CGCCTGCCCG AACTGCAGCA AGGCCGCGTG
GACCTGCTGG CCGCCTCGCT CACGCACAAC AAGGAGCGCG AGGCGCAGAT CGACTTCTCG
GTGTCGACGT TCATCACCGG CCAGAAAGCC ATGGTGAAGA AGAGCAGCGG CATCACGTCG
CTCGCCCAGC TTGATGGCAA GAAGCTCCTG ACGGTCAAGG GTTCGACCAT GGAAGCCAAC
ATTGCCAAGA CCATCAAGAA CGCCGACGTT GTCTCGTTCG ACAACAGCCC GCAGGCACTG
CTGGCCCTGC AGCAAGGCAA GGGCGTCGCG TACGTGAACG ACGAAACCAC CCTGATCGGC
AACATGGCCA AGATGGGCCC GGCAGCCAAG GATTACGCGC TGCTGCCGCA AAACCTGTCG
ACCGAACACC TGGCGCTGGG CATCCGCAAG GGTGAGCCGG CCTTCAAGAA GCAGGTTGAT
GACGTGCTGC TCGGCATGGA AAAGAGCGGC GAGGCGCAAA AGCTGTTCGA CAAGTGGTTT
GGCCCGAACA CCAAGATGGC CTTCCCGCAG CGCACCTTCA AGATTTCTAC CGACAAGATC
GATTAA
 
Protein sequence
MKTSRRLTQF AGAAILAAAT LAATTAHADQ VSDIKKKGEL VCGVLGTDEP FSFLKDPMSR 
EIVGYDVDMC DAIAKSLGVK PVLKQLAVAA RLPELQQGRV DLLAASLTHN KEREAQIDFS
VSTFITGQKA MVKKSSGITS LAQLDGKKLL TVKGSTMEAN IAKTIKNADV VSFDNSPQAL
LALQQGKGVA YVNDETTLIG NMAKMGPAAK DYALLPQNLS TEHLALGIRK GEPAFKKQVD
DVLLGMEKSG EAQKLFDKWF GPNTKMAFPQ RTFKISTDKI D