| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2233 |
|---|
| Symbol | |
|---|
| ID | 6288046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2343168 |
|---|
| End bp | 2344184 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642625805 |
|---|
| Product | PGAP1 family protein |
|---|
| Protein accession | YP_001899799 |
|---|
| Protein GI | 187929312 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.341698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCG CCGATCTGCC CACCTCCCCT GTTCCCCTCG CCTTCCTGAC CGCGGCTACC
GCGCGCCGCA TTGCCGTGGC GCTGCAATGT GCGGCGACGC TGGCGGTTGG CTGGGCGGCA
CATCGCTGGG GCGGATGGAG TTGGCCGGCT GCAAGTTTGC TCGCGGGCGC GGCGCTGGTG
CTGGGATATC TCCTTTCGGT CGGGTGGGCG TTCCTGGTGT CACTGAAGAG CCTGGGCACC
GCGATACCGG ACGACCCCGT ATGGGACCGC ATACCCGTGC CGCGCGAACA CCGCATCGGC
ATCACCGGCT TCATCGCATG TTGGTTGCGC GAATGTGTAT CCGTGGCGTG GATGTTCAAC
GTGCTGCAAC CGTTCCGAGC GCGCGCCGCG TTCGATACAC CGGCGGGTGA TGGCAAGCGC
GTGCCCGTGC TGATGATCCA TGGCTATGGC TGCAATCGCG CGGTATGGTT GCCGATGCAG
CAGCATGTAG CGGCAGCCGG ATACCCGACC GACGCCATCG ATCTCATGCC GCTGCTGGGT
GACATCGACG ACTACGCCCG GGACATGGCG GCCGCCGTCG CGCGCCTGAC GCGCATGCAC
GGCCGTGCGC CCGTTCTGCT CTGCCACAGT ATGGGCGGGC TTGCCGCACG TGCTCTGCTG
CGCCAGTCGC AGCCCTGCCC TGTCGCCCAC GTCATCACGC TCGGCACGCC GCATCGGGGC
ACGGCAATGG CGCGTACGGG ACGCGGCCAC AATGTGCGCC AGATGGCTTG GGCGAGCCCT
TGGCTGCGCC AGCTTGCGGC ATCCGAAATG CCGGCCTCCC GAGCACGCAT CACGTCGATT
TTCTCGTGGC ACGACTCCAT CGTCGGCCCG GCTGGTGCAT CCTGGCTGGA AGGCGCGCGG
CACATCCCAT TCGCGGGCAT CGGCCATGTG TCGCTGTTAT GCGACGCACG CGTGCGTGAT
GCCGTGCTGG CAGAACTCGC CCGCGTCGAA GGCGTCTCTG CTACCCCTTC TGCTTGA
|
|---|
| Protein sequence | MTRADLPTSP VPLAFLTAAT ARRIAVALQC AATLAVGWAA HRWGGWSWPA ASLLAGAALV
LGYLLSVGWA FLVSLKSLGT AIPDDPVWDR IPVPREHRIG ITGFIACWLR ECVSVAWMFN
VLQPFRARAA FDTPAGDGKR VPVLMIHGYG CNRAVWLPMQ QHVAAAGYPT DAIDLMPLLG
DIDDYARDMA AAVARLTRMH GRAPVLLCHS MGGLAARALL RQSQPCPVAH VITLGTPHRG
TAMARTGRGH NVRQMAWASP WLRQLAASEM PASRARITSI FSWHDSIVGP AGASWLEGAR
HIPFAGIGHV SLLCDARVRD AVLAELARVE GVSATPSA
|
|---|
| |