| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2221 |
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| Symbol | |
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| ID | 6289111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2331269 |
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| End bp | 2332528 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625793 |
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| Product | putative transporter signal peptide protein |
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| Protein accession | YP_001899787 |
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| Protein GI | 187929300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTTC GTTGGTTTGT GACCGCGCTG GCGGCTGTGG GGTTGTGCGG CGCGGCAAGT
GCCCAGCCCG AAGGCGCGCC GATCCGGCTG GCCCTGATTG AAGGGCTTTC GGGCCCGTTT
GCCAATGCGG GCGAGGCAGT GGAGCGCAAT CTGCGCATGG CCATCGAAGG CGTAAATGCA
CGCGGTGGTG TGAAGCTGCC TGATGGCCAC CATCCGCTTG CGCTTGTGCG CTTCGATAGC
AAGAACACCG TCGACGAATC GTTGCTGCAA CTGCAGGCCG CCACGGATGC GGGTATCCGC
TTCGTGCTGC AGGGCAACAG TTCTGCGGCA GCGGCTGCAT TGTCGACGTC GATCTCGCGC
TACAACGACC GCCATCCGGA TGCGCGCGTG CTGTTCCTGA ACTACGCTGC CGTCGATCCG
GCGCTGACCA ATGAGGGATG CAGCTTCTGG CATTTCCGCT TCGATGCGTC GGCCGACATG
CGCATGCACG CGCTGACGGA AGTGATCCGC GATGACAAGG CGATCAAAAG GGTCTACCTG
ATTGGGCAGG ACTACACGTT CGGCCGCCAG GTGGCGCAAT CGGCGCGCCA GCAGTTGCGC
GAAAAGCGAC CGGACATCGC GATCGTTGGC GAGGTGCTGC ACCCGATCGG CAAGGTGAAG
GACTTTGCGC CGTATGTGGC GCGTATTGCC GCGTCGGGTG CGGATACGGT CATCACCGGC
AACTGGGGGA ACGATCTGAC GCTGCTCGTC AAGGCCGCGC GAGATGCCGG GCTCAAGGCG
CGCTTCTTTA CCTTTTATGG CAACTCGCTT GGTGCACCAG GCGCGATGGG CGAAGCCGGC
GTCGGCCGTG TGGTGGCCGT GGCGGAGTGG CATCCGAACC TGGGCGGTGC CAAGTCCGAT
GCGTTCTACA AGGCCTTCCG TGCGCGTTAT CCGGCACCCG CCGACGATTA CCCATTGCTG
CGCGACCAGA TGTTGATCGA CATGCTGGCC GCCGCCATCG AGCGTGCCGA GACCACGGAA
GCTGCCGCCG TGGCGCGTGC GCTAGAACGC GCATCGTTCG ACAACGGCTT CCACCGCATT
ACGCTGCGAG CGGAGGACCA TCAAGCCATT CAGCCGCTCG TCGTCGCGCA GATGGAGCGG
GCGGGCATGC CCGGTGCGCT GTTTGATATC GAGGGCTCGG GCTATGGTTT TCGTACGCTA
AAAGTGATTC AAGGGGCGCA AACCGCATTG CCCACGACCT GCAAAATGGT GCGCTATTAA
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| Protein sequence | MVFRWFVTAL AAVGLCGAAS AQPEGAPIRL ALIEGLSGPF ANAGEAVERN LRMAIEGVNA
RGGVKLPDGH HPLALVRFDS KNTVDESLLQ LQAATDAGIR FVLQGNSSAA AAALSTSISR
YNDRHPDARV LFLNYAAVDP ALTNEGCSFW HFRFDASADM RMHALTEVIR DDKAIKRVYL
IGQDYTFGRQ VAQSARQQLR EKRPDIAIVG EVLHPIGKVK DFAPYVARIA ASGADTVITG
NWGNDLTLLV KAARDAGLKA RFFTFYGNSL GAPGAMGEAG VGRVVAVAEW HPNLGGAKSD
AFYKAFRARY PAPADDYPLL RDQMLIDMLA AAIERAETTE AAAVARALER ASFDNGFHRI
TLRAEDHQAI QPLVVAQMER AGMPGALFDI EGSGYGFRTL KVIQGAQTAL PTTCKMVRY
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