Gene Rpic_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2088 
Symbol 
ID6287534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2197991 
End bp2199871 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content70% 
IMG OID642625658 
ProductBile acid-CoA:amino acid N-acyltransferase 
Protein accessionYP_001899654 
Protein GI187929167 
COG category[S] Function unknown 
COG ID[COG4950] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.893347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACCT TCGCGCTCAG CGTGACGCCG GCGGATGACC TGATCGACGT ATCGCGCGGC 
ATCGTCGTGA CGGGGCTCGC GCCTGGCACA CAAGTCGGCA TCGTCGCGCA AACGCGTCGC
GGCAATGATG TGCTGTGGCA CAGCCGCGCC GCGTTCGTCG CCGATGCGCA AGGCACCGTG
GACCTGACGC GCGACGCGCC CGTCTCCGGC GACTACGCCG GCGTCAGCGC GATGGGCATC
GTCTGGAGCC AGCGCCCGGA AGACGGCAAG GCACGCGAGG TGTTTCCACA GCCAGTCGCA
GAGCCGTTGA CGACCACGCT GACGGCCACG GCCAACGGCG AGTCGGTCCA CGCGAGCTTC
GTGCAACGGC TGGCCGCGCC GGGGGTGACG CGCCACGATG TGCGCGACGA TGGTCTGGTC
GGTACGCTAT ACCTGCCCGA TCCGTATGCG CACCCGGGCC CGCGCCCGGC CGTGCTCATC
CTCAACGGCT CGGGCGGCGG CATCAACGAG CCGCGCGCGG CGCTGTATGC CTCGCACGGT
TATGCCGCCT TTGCGCTGGC GTACTTCAAG GCGCCGGGGC TGCCGGACTA CATCTCGAAT
ACGCCGCTGG AATATTTCGA GCGCGCGCTT GCCTGGCTGC GCAAACGCGT GGAGCCGCTG
CACGACTTCG TTGCCGTGAG CGGCCAGTCG CGCGGGGGTG AACTGGCATT GCTGCTGGGC
GCGACATTCC CTGAGGCGGT ATCTGCGGTC ATCGGTTACG TGCCGGGCGC CGTCGTGCAC
AGCGGGCAGA ACGCCGCCGA CCCTGCTGTG GGCCGCGAAG GCCCGACGTG GCTGTATCGC
GGTCAGCCGC TGCCGCATCT GTGGGAAGGC AACCGCACCG CGAGCTGGGC ACCGTTTGAC
GAAGGCCCTG CGCCGCATCG GCATGAACGC GCCATCCGCA CCGCGCTGCA GGATACCGAT
GCCGTGGCAC GCGCGCGCAT CCGCATCGAA CGCGCGCGGG GGCCGGTGCT GCTGCTCTCC
GCCACCGATG ACGGCTCGTG GCCCTCGAGC GACTACTCGC GCATGGTGAC GACCAAATTG
GCCGAGGTAC GCCACCCCTA CCCCGTCCAA CATTTCGATT ACGAAGGCGC GGGTCACGCC
ATCGTCTTCC CATACGTGCC GACCACGCAG CTCGTCTATG CGCACCCGGT GTCGGGCCGC
ATCAGCACCG GGGGCGGCGA GCCGCGCGCC AACGCCCGCG CCGACGCCCA GTCATGGGCA
GCAGTGCTTC GCTTCCTCGC CAGCGCGGTA GCCGCGCGCG GCGCGTCCGT ACCCGATTCC
CGGAGCCTTT CATCAATGGA TTTCACGCCC GCACACGATG TGGCCGACCA GGTTGCCGGC
CTGGACGACG GCAGCCCCAC GCATGCGCTG CGCCATGCCC GCGAAAAGGT GGCAACGGCC
ACGCAGGGCA GCTACAACGC ATTGTTCGAC GCAGGCCTGC CCGGCCTGAC GTTGGGCGAA
CGCCTGCTCG TCGCGCTCTA TGCCTGCCGC CTCACCCCGG CGCCCGAACT GGCCGAACAC
TACCGCGCGC GCCTCGCGAG CACGCCGGTC GACGCAGATG CGTTGCAAGC CGTCGACCAC
GGCGATATCG ACACGCTGAC CGACGCACGC CTGCGCGCCA TCCTCACCTT CACGCGCACG
CTCGTCGAGC GCCCCATCGA GGGCGACCGC GATGCGCTGT TGCGCCTGCC CGCCGCGGGC
CTCGCCACGG CCGACGTCGT GACGCTCGCG CAGCTCATCG CTTTCCTGTC GTATCAGACG
CGGCTCGTCG CCGGCTTGCG CGCCCTCCGC GAAGCCGCCG GCAGCGGCAG CGCCACCGCT
TCCACGGAGA CCGCAGCATG A
 
Protein sequence
MGTFALSVTP ADDLIDVSRG IVVTGLAPGT QVGIVAQTRR GNDVLWHSRA AFVADAQGTV 
DLTRDAPVSG DYAGVSAMGI VWSQRPEDGK AREVFPQPVA EPLTTTLTAT ANGESVHASF
VQRLAAPGVT RHDVRDDGLV GTLYLPDPYA HPGPRPAVLI LNGSGGGINE PRAALYASHG
YAAFALAYFK APGLPDYISN TPLEYFERAL AWLRKRVEPL HDFVAVSGQS RGGELALLLG
ATFPEAVSAV IGYVPGAVVH SGQNAADPAV GREGPTWLYR GQPLPHLWEG NRTASWAPFD
EGPAPHRHER AIRTALQDTD AVARARIRIE RARGPVLLLS ATDDGSWPSS DYSRMVTTKL
AEVRHPYPVQ HFDYEGAGHA IVFPYVPTTQ LVYAHPVSGR ISTGGGEPRA NARADAQSWA
AVLRFLASAV AARGASVPDS RSLSSMDFTP AHDVADQVAG LDDGSPTHAL RHAREKVATA
TQGSYNALFD AGLPGLTLGE RLLVALYACR LTPAPELAEH YRARLASTPV DADALQAVDH
GDIDTLTDAR LRAILTFTRT LVERPIEGDR DALLRLPAAG LATADVVTLA QLIAFLSYQT
RLVAGLRALR EAAGSGSATA STETAA