Gene Rpic_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2082 
Symbol 
ID6287165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2190962 
End bp2192461 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID642625652 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001899648 
Protein GI187929161 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CACAGCAAGA CAACGCGCTG CAAGTGACCG GGCTCGCAGC GCTCGAAGCC 
CGTTTGCACC AGGACCTGTC GTGGTTGGAG CTGCCCGCGA AGCACTGGAC GCTGCCGCAC
ACGTTGGAGG GCCGATCCGT GCTGGATGTG GCCGTCATCG GTGGCGGCAT GGCAGGCCTG
GCGGCCGCGG CATCGCTCAA GCATCTCGGT ATCGGCGTGA TGGTGTTCGA CCGCTCGCCC
GCCGGCTTCG AAGGCCCATG GGCGACGACG GCGCGCATGG AAACGTTGCG CTCGCCAAAG
CAGTTGACCG GCCCTGCGCT CGGGCTGCCG GCGTTGACGT TTCGCGCATG GTTTGAAGCG
CAGTTCGGCA CCGATGCGTG GGAGGTGCTC GACAAGATCC CGAGACTGCA ATGGATGGAC
TACCTGCGCT GGTACCGCCG CGTGCTGCAG CTCGACGTGC GCAACGAACA CCACGTAAAG
GCCATCCACC CGCGCGTGGA TGGCGCCGTT GAATTGCTGA TCGACGCGCC TGACCAACCG
ACGCAGCGCG TGTTTGCGCG CCGCGTGGTG TTGGCTACCG GCCGGGACGG GCTTGGCGGC
GCATCCGTGC CGGACTTTGC GCGCCGGCTG CCGCGCCGCT GGTGGGCGCA TTCGTCTGAC
GAGATGGATT ACGGCGCGCT GGCGGGCAAG CGCGTGGGCG TGATCGGCGC CGGTGCGTCC
GCCATGGATT CGGCAGCAAC GGCACTGGAA GCCGGTGCCG CCAGCGTCGA CATGCTGATC
CGACGCGCCG ACCTGCCGCG CGTGAACAAG GGCAAGGGTG CGGGCAGCCC AGGGCTCGTG
CATGGCCACC TATATCTGCC CGACGCCTGG AAATGGCGCA TCCGTCATTA CATCAATGTC
GAGCAGGTTC CCCCGCCGCG CGGCAGCACG CTGCGTGTGT CGCGGCATCC GAATGCGCGC
TTCAATTTCG GCTGCGGCAT TCTGGGCGTG GACGAGCACG ACGGCGTGCT GCACGTGGCC
ACGACCAAGG GCGTATTCCA ACTGGACTTC CTGATCTTCT CGACGGGCTT TCGCACCGAT
TGGGCCGCAC GCCCCGAATT CAGCGCTCTG GCACCGCATA TCCGCCAATG GCGAGACCGC
TACACGCCGC GCCCCGACGA GGAAGACGCG GAACTCGCCG ATTCACCCGA CCTCGGGCAC
GCGTTCGAAT TTCGCGAGAA AACGCCCGGC ACGCTGCCTG GCCTGTCGCG CGTGCATTGC
TTCTGCTATC CCGCGTCCGT CACGCACGGC AGCGTCTCGG GCGACATCCC GGCCATCAGC
GAAGGTGCGA AGCGGCTGGC GCAGGGCATC GCCGGGTTGC TGTACCAGGA AGACATCGAC
GCGCACTACG CCGCCATCCA GGCCTACGCC GAGCCGGAAA TCTTTGGCGA TGAATGGACC
CCAGCCCCAC CGCCCGGCGT GGAAGCGAAT GCCACTTCCA GCCAGGAGGC TGCCCGATGA
 
Protein sequence
MTAAQQDNAL QVTGLAALEA RLHQDLSWLE LPAKHWTLPH TLEGRSVLDV AVIGGGMAGL 
AAAASLKHLG IGVMVFDRSP AGFEGPWATT ARMETLRSPK QLTGPALGLP ALTFRAWFEA
QFGTDAWEVL DKIPRLQWMD YLRWYRRVLQ LDVRNEHHVK AIHPRVDGAV ELLIDAPDQP
TQRVFARRVV LATGRDGLGG ASVPDFARRL PRRWWAHSSD EMDYGALAGK RVGVIGAGAS
AMDSAATALE AGAASVDMLI RRADLPRVNK GKGAGSPGLV HGHLYLPDAW KWRIRHYINV
EQVPPPRGST LRVSRHPNAR FNFGCGILGV DEHDGVLHVA TTKGVFQLDF LIFSTGFRTD
WAARPEFSAL APHIRQWRDR YTPRPDEEDA ELADSPDLGH AFEFREKTPG TLPGLSRVHC
FCYPASVTHG SVSGDIPAIS EGAKRLAQGI AGLLYQEDID AHYAAIQAYA EPEIFGDEWT
PAPPPGVEAN ATSSQEAAR