Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2063 |
Symbol | |
ID | 6287204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2174481 |
End bp | 2175920 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642625632 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001899629 |
Protein GI | 187929142 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0432509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCC CCCTGACAGC GGACAGCGCG CCGACTGCCA TCGCTCAACA CGATCAAGAC ACCCGCGCCG CCACGGCGCT TTCTTCGCGG ATGGACCGCT TGCCCATCAC ACGTAACCTG TGGATGCTAG TGCTGTTGAT TTCGCTGGGT GGCTTTTTCG AGGTCTACGA TCTGATCTTC ACGGGCTATA TCGCGCCCGG TATGGAAAAA AGCGGGCTGC TCAAGGCCAC GACCGATGCG TTCTTCGGGC TGCATGGCAT GGCCGGCTTC ATTGCCGCCA CGTTTGCGGG GCTCTTCGTC GGCACGTTCG GCTTGGGCTG GCTGCCCGAT CGTTATGGGC GCCGCACGGT GTTCACGGTA TCGCTGCTGT GGTACTCGAT CGGCTCCGCC ATCATGGCGT GCCAGCAGAG CCCCGAAGGC CTGCTGATCT GGCGCTTTCT CACCGGCATC GGTGTCGGCA TCGAGATCGT GACCATCGAC AGCTACGTCA CCGAACTCGT GCCGCAGCAT ATGCGCGGCC GCGCCATGGC GTTCAATCAG ATGGTGATGT TTGCCGCCGC ACCCGCTGCG GCCATTCTGT CGTACTGGCT CGTGCCGACC ACCCTGCTGG GGTTCGAAGG CTGGCGCTGG GTGGTGCTGT TGGGCTCTGC CGGCGCGGTG CTGGTGTGGT TCATCCGCCG CGCCGTACCG GAAAGCCCGC GCTGGCTGGC CATGCATGGC CATATCGACC AGGCAGATGC CGTTGTCCGC CAGATGGAAG CCGCCGCCGA GCGCGAATCC GGCAAAGCCC TGCCACCGCC GCTGCAGGCC GTCGTGCAGC CGCCGCACCG CCGCGCATCG CTGGCGGAAC TGTGGCGCCC GCCGTATCGC TCGCGCCTGA TCATGCTGAT CGTCTTCAAC TTCTGCCAGG CCATCGGCTA CTACGGCTTT GCCAACTGGG TGCCGACGCT GCTCATCGGC CACGGCATCA CCGTGACCAA GAGCCTCCTG TATTCGTTCA TCATCGCCAT TGCGCTGCCC GTCGGGCCGT TGCTGGCCAT GGCCTATGCC GACCGCATCC AGCGCAAGTG GCTGATCGTT GGTGCCGCGT TTGCCGTCAT CGTGTTCGGC GTGACGTTCG GGCAACTGAA AGATCCACTC GCGTTGATCG TGCTGGGCGT GCTGATCAGC CTCGCTGGGC AGACCATTTC GGTGTGCTAT CACGCCTACC AGGCCGAGCT GTTCCCGACC TTCATCCGCT GTCGCGCCAA TGGCATCGTG TATTCGGCCA GCCGCATCGG CGCCATGTTC TCGGGCTTTT TGATTGCCTT CCTGTTGCGG CACTTAGGCG TGCCGGGCGT GTTTGCGGGG ATCACCGTAT GCATGCTGGT GGTGATGCTG GCGATTGGCG GCTTCGGGCC GAAGAGCAAC GGCCTGCGGC TGGAAGAGCT GTCGCACTAG
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Protein sequence | MQRPLTADSA PTAIAQHDQD TRAATALSSR MDRLPITRNL WMLVLLISLG GFFEVYDLIF TGYIAPGMEK SGLLKATTDA FFGLHGMAGF IAATFAGLFV GTFGLGWLPD RYGRRTVFTV SLLWYSIGSA IMACQQSPEG LLIWRFLTGI GVGIEIVTID SYVTELVPQH MRGRAMAFNQ MVMFAAAPAA AILSYWLVPT TLLGFEGWRW VVLLGSAGAV LVWFIRRAVP ESPRWLAMHG HIDQADAVVR QMEAAAERES GKALPPPLQA VVQPPHRRAS LAELWRPPYR SRLIMLIVFN FCQAIGYYGF ANWVPTLLIG HGITVTKSLL YSFIIAIALP VGPLLAMAYA DRIQRKWLIV GAAFAVIVFG VTFGQLKDPL ALIVLGVLIS LAGQTISVCY HAYQAELFPT FIRCRANGIV YSASRIGAMF SGFLIAFLLR HLGVPGVFAG ITVCMLVVML AIGGFGPKSN GLRLEELSH
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