Gene Rpic_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2015 
Symbol 
ID6287881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2119956 
End bp2120777 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID642625583 
Productprotein of unknown function DUF81 
Protein accessionYP_001899581 
Protein GI187929094 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.788347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGA TGGAAGCGGG TTGGATCATC AGTGCGGGGC TGGGCTCCGT GGTTGGCCTG 
ATCCTGGCGC TGACGGGCGC AGGCGGCGCC ATTGTCGCGG TGCCGCTGCT GATTTTTGGG
TTGCATCTGT CGGTGCCGGA AGCTGCGCCC ATTGCACTGC TGGCGGTGGG ACTGTCCGCC
GGGCTGGGTG CGACGCTCGG CTTGCGCGAA CGCAAGGTCC GCTACAAAGC CGCTGGGCTG
ATGGCGCTGT GCGGCGTGGT GATCTCGCCG TTCGGCATCT GGGTTGCGCA CCGCGTGCCG
AACACGCCGC TCACGCTGCT GTTTGCAGTG GTGCTCGCCT ACGTGGCGGT ACGCATGTTC
CGGCAAGCGC GCGCAGCACC GTCCACCGAG CCGCGCCCGA GGCGGACAGC ACCGCCCTGC
CACCTTGACA GCACCACGGC CAAGCTCGTC TGGACGCTGC CGTGCGCGCG CGCATTGGCT
GCGTCGGGCG TGGGCGCAGG CTTCCTGTCC GGGTTGCTGG GCGTGGGCGG CGGCTTTGTC
ATCGTGCCCG CATTGCGCCG CGCGACCGAT CTGCCGATGC AAACCATCGT CGCCACCTCG
TTGGCGGTGA TTGCGCTGGT GTCCGGTGGC GGTGTGGTCG CCTCGGCCAT CGGCGGGCAT
GTCGATTGGC ATATTGCGCT GCCGTTTGCC GCCGGCGCCT TGACCGGCAT GCTAGTGGGC
AGACGCTTTG CGCGGCATCT TGCAGGGCCG GCGCTCCAGC AAGGATTTGC CGCGTTTGCG
GGCGTCGTGG CGCTCGGGAT GATTGTCCGA ACACTCATTT GA
 
Protein sequence
MSPMEAGWII SAGLGSVVGL ILALTGAGGA IVAVPLLIFG LHLSVPEAAP IALLAVGLSA 
GLGATLGLRE RKVRYKAAGL MALCGVVISP FGIWVAHRVP NTPLTLLFAV VLAYVAVRMF
RQARAAPSTE PRPRRTAPPC HLDSTTAKLV WTLPCARALA ASGVGAGFLS GLLGVGGGFV
IVPALRRATD LPMQTIVATS LAVIALVSGG GVVASAIGGH VDWHIALPFA AGALTGMLVG
RRFARHLAGP ALQQGFAAFA GVVALGMIVR TLI