Gene Rpic_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2000 
Symbol 
ID6289375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2108587 
End bp2109090 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID642625569 
ProductOmpA/MotB domain protein 
Protein accessionYP_001899567 
Protein GI187929080 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.297177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCAC TGTCCGCGCA ATTAGCCAAG CAGCGTGAGT CGTTGTCGGA ACGCATTGCG 
CGCGCGCTGG CTCCCGAAGC CGGGGCGGCC CCGGTCGGCA TCAGCACAAA AGACGATCGA
ATCTATATCT CCTTCAATAG CGACGAAGGT TTCGCCTCCG GCCGAGCAGA CCTTATGCTG
ATGCTCGCGC GCCAACTCGA CCGGCTCGCC ACCGTGCTTG CCGACACGCG TGGCAAGGTG
ACCGTCCTCG GGCACACCGA CGATGCCCCC GGCCCGCGCG ATCGCATGGA GTCGAACCTC
GCGCTGTCAA CCGCACGCGC CACGGCGGTC GCGCGACATC TTCAAGAGCG CGGGATCGCT
TCGGATCGCT TGTCCATCAT TGGTCGTGGC GTGAAAGATC CCGTTGGAGA CAACCGCACC
GCCGCGGGCA GGGCGTTGAA CCGACGCGTG GAGATCATTC TTGAAAGCGT GCCAACTTCG
CAGCCAACAA GCCCTCAGCA ATAG
 
Protein sequence
MEALSAQLAK QRESLSERIA RALAPEAGAA PVGISTKDDR IYISFNSDEG FASGRADLML 
MLARQLDRLA TVLADTRGKV TVLGHTDDAP GPRDRMESNL ALSTARATAV ARHLQERGIA
SDRLSIIGRG VKDPVGDNRT AAGRALNRRV EIILESVPTS QPTSPQQ