Gene Rpic_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1798 
Symbol 
ID6288751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1891005 
End bp1891928 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content62% 
IMG OID642625361 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_001899367 
Protein GI187928880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.889521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.571241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA GTATTTTCTT CGGCGGCTCG GTCATCGCTG CGTTTGTCGC CGGCATGATC 
GCGCTGTTCG CGCCGTGCTG CCTTTCAGTC ATGTTGCCGG CCTATTTCGC CAGCTCCTTT
CAGAATCGAA GCCGACTGGT CGCCATGAGC TTCGTCTTCG CCGCCGGCGT TGGGACCGTC
ATTCTGCCGT TGGTCATGGG TTCCATCGCG CTACGCCAGC TGTTTGTTAC GCAGCATGCT
GCCATCTATC TGCTGGGGGG CTCGATCATG CTTGGCATGG CGCTTTTTAC CTTGCTGGGT
GGCAAGCTGC AACTGCCGAT GCCGGCGCGG CGCGCAGCCG CAGACACTGG GCCATTCGGC
ATCTACACGC TTGGCATGTT TTCGGGTGTA GCCAGTGCAT GTTGCGCCCC TGTGCTGGCC
GGAGTCCTCG CGCTTTCCAG CCTCGCGTCA TCCGCAGCGC TCGCTGCTGG ATTGGGTAGC
GCCTACGTAT TCGGGATGGT CGCGCCACTC TTCGCCATCT CGCTGCTGTG GGAGCGGTTC
GACTGGCGCT CCAGTGTCCT GTTTCGGACA CGAATGGTGA CATGGCGCAT CGGCCCTCTG
CAGCGCACGC TATCCGTGTC CATGTTGATG AGTGCAGCGC TGCTCGGTGT CATGGGGGCC
CTCGCCATTT GGGAGGCGTT TTCCACCGAC TCGATGTCGA CGTCGAGCCA CTGGTCATTG
GCCGTTGCCG TGCAGTTGCA ACACGTCGGT CGCAGTGTCA CGCAAGCCTT GTTGGTCGTG
CCGAACTGGC TGATGGCCGT GGTTCTTCTG TTTTCGATCG CGGCACTCGG CTGGCGAGCC
CGATCGCAAT GGCGAAGGAA CGGCCTGTCG GATGGCGCCG CTGGCGTCGA AGAAGAACCG
ACGCCTTCAC GGAGAATCGA ATGA
 
Protein sequence
MDTSIFFGGS VIAAFVAGMI ALFAPCCLSV MLPAYFASSF QNRSRLVAMS FVFAAGVGTV 
ILPLVMGSIA LRQLFVTQHA AIYLLGGSIM LGMALFTLLG GKLQLPMPAR RAAADTGPFG
IYTLGMFSGV ASACCAPVLA GVLALSSLAS SAALAAGLGS AYVFGMVAPL FAISLLWERF
DWRSSVLFRT RMVTWRIGPL QRTLSVSMLM SAALLGVMGA LAIWEAFSTD SMSTSSHWSL
AVAVQLQHVG RSVTQALLVV PNWLMAVVLL FSIAALGWRA RSQWRRNGLS DGAAGVEEEP
TPSRRIE