Gene Rpic_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1788 
Symbol 
ID6286992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1884087 
End bp1884449 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID642625352 
Productmercuric resistence transcriptional repressor, MerD, MerR family 
Protein accessionYP_001899358 
Protein GI187928871 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02054] mercuric resistence transcriptional repressor protein MerD 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.32853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.343765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCT ACACAGTGTC GCGTCTGGCC CACGATGCCA GCGTGAGCGT CAACGTGGTG 
CGTGACTATG CGCTGCGCGG CCTGCTGCAC CCCGCGCGCC GCACGGAGGG TGGCTATTGG
CTCTACGATG CTCGGGCGCT GGCCAGATTG CGCTTCGTTC GGGCTGCGTT CGAGGCCGGC
ATCGGCCTGG ATGAACTGAG CCGCCTGTGT CGGGCGCTCG ACGCGAACGA TCGCGCCACC
TTGATCGAGT GTGTCGAGCA GTTAGGCCAG CAGATCGCGG CCCGGCAGGC AACATTGTGC
GCGGTTAAGG CGGAACTGAA CGAGCTGGCT TGCTGCGCCG ACGAAGTTCG TGCCCCATCC
TAG
 
Protein sequence
MNAYTVSRLA HDASVSVNVV RDYALRGLLH PARRTEGGYW LYDARALARL RFVRAAFEAG 
IGLDELSRLC RALDANDRAT LIECVEQLGQ QIAARQATLC AVKAELNELA CCADEVRAPS