Gene Rpic_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1716 
Symbol 
ID6287746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1810243 
End bp1810629 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content57% 
IMG OID642625280 
Productcopper resistance protein CopC 
Protein accessionYP_001899286 
Protein GI187928799 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.200114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA GTCGCCGCGC ATTGCGAGGC TCAGTCACCG TCCTGTTCGC GATTCTGAGC 
GAGATCGCTC TCGGCCATCC AAAGCTGGTT TCATCGAGAC CAGCGAACAA TTCTGAAGTG
GCCGCCCCAA AGCGAATCGA ATTGAGATTT TCAGAGGAAC TTGTATTCCC GCCTTCGGGA
GGTAATCTAG TTATGGCGTG GCTGCCGGGC CGGGCGCTTC ACGGGCCGAT GAAGATTCCG
GCTGAAGTAT CGCGTGGCGG AGACGCCAAG ACGGTCGTTA TTCAGCCGAC TCAACCTCTC
ATGGCTGGTT CCTATCGCGT TGACTGGCAA GCGGTCTCAT CCGATGGGCA TCCTGTCAAT
GGCAGGATCG TATTCCGAGT ACGATGA
 
Protein sequence
MSASRRALRG SVTVLFAILS EIALGHPKLV SSRPANNSEV AAPKRIELRF SEELVFPPSG 
GNLVMAWLPG RALHGPMKIP AEVSRGGDAK TVVIQPTQPL MAGSYRVDWQ AVSSDGHPVN
GRIVFRVR