Gene Rpic_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1700 
Symbol 
ID6289198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1791771 
End bp1792631 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content59% 
IMG OID642625264 
Productprotein of unknown function DUF344 
Protein accessionYP_001899270 
Protein GI187928783 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.484531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG GCAAGTCGAA GAAAAAGACC ACTTCATCGG ACGCCGAACA CGTAACTGGC 
TTATCGTCCA GCCAGGCGCG AGTCGATGCT GCCAAAGGAG TCCAGGGTCG CGAGGACTAC
GAGGCGCAAC TGCACCTGCT GCAAATTGAA TTGGTCAAGC TTCAACGGCA TTTCATCGGG
TGTGGTGACC GCATCCTTGT CCTGCTGGAG GGGCGGGATG CGGCAGGCAA AGACGGCAGC
ATCAAACGCA TTATCGAATT TCTCAGCCCC CGCGAGACGA GGGTGGTAGC GCTGGGTAAG
CCGTCAGATC GCGAGCGCAC CGGCTGGTAT TTCCAGCGCT ACGTGCCCCA TCTTCCTCTC
GCCGAAGAGT TTGTCCTCTT CAACCGCAGC TGGTACAACC GGGCAGGCGT TGAGAGCGTG
ATGGGCTTCT GCACTGCTGA GCAGTATGAC GAGTTCATGT ACTCCGTGCC CCACTTCGAG
GAAATGCTCG TCAATTCCGG TATCAAGCTG CTTAAGTACT ACCTCGACAT CAGCAAAGCC
GAGCAAGCTC GCCGACTTGC CGAGCGGCGC CGCGATCCGC TCAAGCAGTG GAAGACGAGC
CCGGTCGACG CCGTGGCGTT GAAGCATTGG GATGCCTATA CGACGGCACG CAACGCCATG
CTGATGCATA CGCACACGGC TGCCGCGCCA TGGCACATCG TGCTCGCCGA CGACAAGCGC
ACGGCCAGGC TCAACTTGAT TCGTCACATC CTGTCGCGGC TGCACTACGC GGGCAAGAAG
AACAAGCTGG TCGCTCCCGA TCCTGAGGTC GTGTTCGAAT TTTCGAAGGA GTGCCTCGAT
GCGAAACGTC TCGCATCCTG A
 
Protein sequence
MAKGKSKKKT TSSDAEHVTG LSSSQARVDA AKGVQGREDY EAQLHLLQIE LVKLQRHFIG 
CGDRILVLLE GRDAAGKDGS IKRIIEFLSP RETRVVALGK PSDRERTGWY FQRYVPHLPL
AEEFVLFNRS WYNRAGVESV MGFCTAEQYD EFMYSVPHFE EMLVNSGIKL LKYYLDISKA
EQARRLAERR RDPLKQWKTS PVDAVALKHW DAYTTARNAM LMHTHTAAAP WHIVLADDKR
TARLNLIRHI LSRLHYAGKK NKLVAPDPEV VFEFSKECLD AKRLAS