Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1657 |
Symbol | |
ID | 6288169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1740938 |
End bp | 1741600 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642625221 |
Product | hypothetical protein |
Protein accession | YP_001899227 |
Protein GI | 187928740 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00667866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCACG ACACACAATC CGGCTACGGG CTCTGGTCGT TGGTCATCAT CAACTCGGCC ATCTTCATCA TCTTCGCTTT CAGCTTCACC AAGCCAAAGA CCTCGCGTGA CTGGCGGTCC TTCGGGGCCT TCTCGGCGTT TCTCGTGGCG CTGTTTACGG AGATGTACGG GTTCCCACTG ACGATCTACT TGTTGCTGCC CTGGTTGAGC AAGCATTTTC CCGGTATCGA TTTCCTCTCT CACGACGCGG GGCATTTGCT GGAGGTGATG TTCGGCTGGC GCGCTAATCC GCATTTCGGG CCGTTCCACA TCCTAAGCAA CCTGCTGATC TTCGGTGGTT TCATCATGCT CGCTTCCGCC TGGCGGGTGC TGTATCTGGC GCAGCAGCAG CACCGTCTGG CCACCGGTGG ACTCTATACC CGCATGCGCC ATCCGCAATA TGTGGCGTTT GTCCTGATCA TGCTCGGCTT CCTGCTGCAG TGGCCGACGT TGCTCACGCT GATCATGTTT CCAGTGCTGG TCTGGATGTA TGTTCATCTC GCGCTGACTG AGGAGCGAGA TGCGCTGGCC GAGTTCGGCC GGGCATACGA AGCGTATTGT GAGCGCACAC CACGTTTCAT CCCCCGTTGG AGCAGTGGTG CGTCGAAGGC GTCGTCTCAT TGA
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Protein sequence | MQHDTQSGYG LWSLVIINSA IFIIFAFSFT KPKTSRDWRS FGAFSAFLVA LFTEMYGFPL TIYLLLPWLS KHFPGIDFLS HDAGHLLEVM FGWRANPHFG PFHILSNLLI FGGFIMLASA WRVLYLAQQQ HRLATGGLYT RMRHPQYVAF VLIMLGFLLQ WPTLLTLIMF PVLVWMYVHL ALTEERDALA EFGRAYEAYC ERTPRFIPRW SSGASKASSH
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