Gene Rpic_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1612 
Symbol 
ID6286587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1699342 
End bp1699725 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content63% 
IMG OID642625176 
Productputative outer membrane lipoprotein transmembrane 
Protein accessionYP_001899182 
Protein GI187928695 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA TGCGCCGCGG TGATGCCGAG CAGGTCACTG TTGTTCGCGT TCGCAATGTC 
ACGATCACTG GTGACGATGG CTACATGTCC GCATCAAGCG GCATGCCCGG TCTCATCGGG
GCAGGCATCA GCGCATTCCT CGGTGGCCGT TCCATCGGTA ACGGCAATGG CCGCTATGTC
GCCGGCGCAG TCTCCGGCGC CGTGGGCGGT GTGATCACGC AGCAAGTCTC CCAGGTGCTG
AACAAGCGCC CGGGCGTAGA AGTCATCGTT CGCACGGATG CTGGGCGAAC GTTGGTCGTT
ACCCAGGATG CCACGCAGCA GTTTGTGGCT CGGGAGCGTC TGTACATGAT CTCCAGCGCG
GCGGGCTTTC GCCTGACCCG CTGA
 
Protein sequence
MEVMRRGDAE QVTVVRVRNV TITGDDGYMS ASSGMPGLIG AGISAFLGGR SIGNGNGRYV 
AGAVSGAVGG VITQQVSQVL NKRPGVEVIV RTDAGRTLVV TQDATQQFVA RERLYMISSA
AGFRLTR