Gene Rpic_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1578 
Symbol 
ID6286962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1667624 
End bp1668694 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content58% 
IMG OID642625143 
Producthypothetical protein 
Protein accessionYP_001899149 
Protein GI187928662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.223334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGT GGTCATGCGC AAAGACGCAG CTCTGGCCGA TACGATACAA GCCCATACCT 
GGTGAGCTAT TATCGAGCTG GATCGTGCGG CTAGCGCATG GCCATGGAAT GGGCGTGATG
CCGTTCTGCA ACGTGGCGCT TGGTCCCATG GCTCTGCAAC TGACGATGGA TATCGACCGA
CGCAGTCGAG AGTCCCTTCT GAAGGCGTTG GCGTTGCACA CAGGAACGCA TCCGGACGCA
GTGCATCAAG CCACGCTGCG CGTCTACGAG GGGGTTCTCT ATCGACAGTT TCACGTTGGG
GGATTCCTCC CTTGGGTGAT CGCTATCAAT CTGCCGCGGA GCGTCAGGCT TGGCCCAGGT
CTCCAGTTTT GCCCGTACTG TCTCAGAAGT GACCCGGTAC CGTACTTCCG TCTCTCCTGG
AGGGTTGCAC TTCAAACCTT CTGTGAGCGG CACCAATGCT TGTTGCTGGA TCGGTGCCCA
GGCTGTGGCG CTTGCTTGTT TGTTCAGAGG GTCGATTCAA ACTGGTGCCA CGCGGAAATA
GATGGTATTT GCCATTGCCA CAACTGCGAT TTCGACCTCC GATTGGCGGA GGCACCTGCA
GTAGACGATC GAGGGAGCGG GCTTTTAGCT CTGCTGCAGC AACTGACCCG CGAGCTTTCT
GTCGTGAACG CGATAGGTCT GCCAGGCCTG TTAGAGCGTC TACACGCTAT GGCGGTGACG
CTGTTGTCGG GCAAGGCCAA GCCGCGCCTC TGCAATAGCC TTGCGTGTCG CTTCGGCTAC
GCTGACCTGG AAATTCAACA GGCCAGAATG CCGGCGTTCG AACTGCAATC TGTAGTGACA
CGGCATGCGG TGCTTCTTTG GTCCCTCTGG CTTCTTCAAC GCGACCCCGA TGCGTACGAG
CGGCCGGTCA AGCCGGTCGC TCCGCTACAC CATCGGTTCA TCAAAGAGAT CCTGACGCAG
CCACGAATCG ATGCGGGTGG TCAGACGGGC TGCGACTCGT TCGGAGACCT TTCAATCGCA
GGGGAGAGTT CAGCGCAGAT ACGCGATGGC CGCGTGGTAC AGCTGCATTG A
 
Protein sequence
MKTWSCAKTQ LWPIRYKPIP GELLSSWIVR LAHGHGMGVM PFCNVALGPM ALQLTMDIDR 
RSRESLLKAL ALHTGTHPDA VHQATLRVYE GVLYRQFHVG GFLPWVIAIN LPRSVRLGPG
LQFCPYCLRS DPVPYFRLSW RVALQTFCER HQCLLLDRCP GCGACLFVQR VDSNWCHAEI
DGICHCHNCD FDLRLAEAPA VDDRGSGLLA LLQQLTRELS VVNAIGLPGL LERLHAMAVT
LLSGKAKPRL CNSLACRFGY ADLEIQQARM PAFELQSVVT RHAVLLWSLW LLQRDPDAYE
RPVKPVAPLH HRFIKEILTQ PRIDAGGQTG CDSFGDLSIA GESSAQIRDG RVVQLH