| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1471 |
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| Symbol | |
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| ID | 6289046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1563798 |
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| End bp | 1564382 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642625036 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001899042 |
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| Protein GI | 187928555 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000473762 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAGCTTG ACACCGGCAA GATCGCCACG TTCCCCGCCT TTGCCGAGGC CGTGCACGGC
GTGCTGACGC AGTGGAAGGC CGAGCGCTTC GATTACCTCG TCAACAACGC CGGCGTGGGC
GTGCACGCCA CGGTGGCCGA AACCACTGAA GCCCAGTTCG ACGAACTGAT GAATGTGCAT
TTCAAAGGCG TGTTCTTCCT CACGCAGATC CTGCTGCCGC TCATGGCTGA CGGCGGGCGC
ATCGTCAATA TCTCGTCGGG GCTGGCGCGT TTTGCGCTGC CGGGCTACGG CGCGTATGCG
GCAATGAAGG GCGCGGTGGA GGTGCTGACG CGGTATCTGG CGAAGGAACT CGGCCCGCGC
GGCATTGCCG TGAACGTGGT GGCGCCGGGC GCCATCGAGA CGGACTTTGG TGGCGGTGCG
GTGCGCGACA ACGCGGGCCT CAATGCCATG GTGGCGGCCA ATACGGCGCT GGGACGCGCT
GGTGTGCCGG ACGATATTGG CGGCGTGGTG GCCTCGCTGC TGTCGCCGGA CAACCGGTGG
ATCAATGCGC AGCGTATTGA AGCTTCGGGC GGGATGTTCC TCTAA
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| Protein sequence | MQLDTGKIAT FPAFAEAVHG VLTQWKAERF DYLVNNAGVG VHATVAETTE AQFDELMNVH
FKGVFFLTQI LLPLMADGGR IVNISSGLAR FALPGYGAYA AMKGAVEVLT RYLAKELGPR
GIAVNVVAPG AIETDFGGGA VRDNAGLNAM VAANTALGRA GVPDDIGGVV ASLLSPDNRW
INAQRIEASG GMFL
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