Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1399 |
Symbol | |
ID | 6286570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1490718 |
End bp | 1491866 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642624966 |
Product | Zonular occludens toxin |
Protein accession | YP_001898972 |
Protein GI | 187928485 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0437506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.88408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGC TCATCACGGG TCAACCTGGA AACGGTAAGA GCCTCTACAC GATTGCGTTT GTTGAGGCGA AGCGGAAGGC TGAGAGCCGT CCGGTGTTCT ACTTCGGCAT TCCCGAGCTG TCGTTGCCTT GGACGATGCT GGACGATCCA ACGAAGTGGC ATGAGTGCCC GGAAAAATCG ATCATCGTCA TCGACGAGGT ACAGAAGGTC ATGCCGCCGA GGCCTTCCAG CTCGAAGGCG CCGCTGCATG TTTCAGAGCT GGAGACCCAT CGGCACAAGG GTTTCGATCT GTTCTTCATG ACGCAGGACC CGAGCCTGGT CGATAACCAT TTGAAGAAGC TCGCCGGCGA GCACATCCAC CTGATTCGTC AGTGGGGCCG TCAGAAGGCG GATCTGTTCA AGATGCAGAA GGTGCAGGAT CCAACGAACG CGAACCTTAA GCGTGCGTTG CACAGCAGCT TTCCGTATCC GAAGGAGGTG TTCGGCTGGT ACAAGTCCGC CGATGCTCAT ACGCACAAGA AGGCGATTCC GCTGAAGTAC TACATGATGT ACGCGTTGCC GGTGGTGGCG TTGGCGGCAG CGCTGTTCGG CGGTTGGAAG CTCTGGAAGA TCTCGCATCC TGACGTACCG CAGGTACAAG TTCCTGTTTC TGGTGCCGCA GCTGGTCAAC TAGGTGCGCC TGGTGCAGCG GCTGCTGCAG CTCAGCGTGC GCCGATGACG GCCAAGGAAT ACGTGGCGAG TTATGTGCCT CGTGTGCCTG GCCTGCAGTA CACCGCCCCG GCCTATGATG AGCTCACCAA GCCTTCCCGC GTTCCCGTTC CAGCTGCGTG CGTGCAGATC CGTGGCGGCT GTGAGTGCTG GACGCAGCAG GGCACGCGCC TGGAGACCAC GCCGCAGATC TGTGACCAGG TGGTGAAGCG CGGCTTCTTT GAAGCGTTTG AGGCCAACGG TCAGATGGCC AGGAGCCAGG AGCGTGTTCA GCCCGCTCCA CAGCCGGTTC CTGCCCCGCC TGCACAGGCG CAGGAGGTGA GGGTAGTGGT AGACGCTTCC AGGCCCGCGC AAGCGGCCCA GGAGCCTCGC AAACGCACCG TCATAGGTTC GGGCAAGGCT CGGCGCGTTG ATGAGCTCGA AGTCTTTCCT GAGGGCTGA
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Protein sequence | MLTLITGQPG NGKSLYTIAF VEAKRKAESR PVFYFGIPEL SLPWTMLDDP TKWHECPEKS IIVIDEVQKV MPPRPSSSKA PLHVSELETH RHKGFDLFFM TQDPSLVDNH LKKLAGEHIH LIRQWGRQKA DLFKMQKVQD PTNANLKRAL HSSFPYPKEV FGWYKSADAH THKKAIPLKY YMMYALPVVA LAAALFGGWK LWKISHPDVP QVQVPVSGAA AGQLGAPGAA AAAAQRAPMT AKEYVASYVP RVPGLQYTAP AYDELTKPSR VPVPAACVQI RGGCECWTQQ GTRLETTPQI CDQVVKRGFF EAFEANGQMA RSQERVQPAP QPVPAPPAQA QEVRVVVDAS RPAQAAQEPR KRTVIGSGKA RRVDELEVFP EG
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