Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1379 |
Symbol | |
ID | 6286146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1475626 |
End bp | 1476525 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624947 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001898953 |
Protein GI | 187928466 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.884009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.119976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCG ATCTGGAATC GCTGCAGGTA TTGGTCTCGG TAATCGAGGA AGGCAGCCTG GCGGCGGCTT CCGAGCGGCA GCACATCGTG CCTTCGGCCA TCAGCCGACG CATTGCGGAG CTGGAAAACG ACGCCGGCAC CGCCCTGCTC TATCGGCACA GCCGTGGCGT GGAGCCCACC CCGGCGGGCT CGGCGTTGTA CTACCGGGCC AAGCGCCTGA TCGATCAGAT GCAGGAAATC TCGTCGGAAA TGAGCGAGTA CGCCCAGGGC GTGCGGGGGC ACGTGCGCAT GCACGTCAAC TTTTCGACCA TGGTCCAGTA CCTGCCGGGC GACCTGTCCT CGTTCCTGTC GATCAACCCC GACGTGAAGA TCGACCTGAT GGAGAAAAGC AGCAGCCAAG TCCTGCGCTC GGTCGAAGCG GGTACCGCTG ACATCGGCAT CTGCAGCCAG CCGGAAGCTG CACCGGGGCT GGAAGTACGG CCGTATCACG TCGATAGGCT CGTCCTGATC GTGCCGCACG ACCACCCGAT CGGCGCGGCG CGCCACCTGC GCTTTGCCGA TACCCTGGAC TATGACTACG TGAGCATGCC GCTGGGCGCG TCAATCTCCA CGCTCTGCGC GCAGAGCGCC GAGCAGGCCG GCAAGCAGCA CAAGATCCGC ATCCAGGTGA CCAGCTTCGA GGGGCTGCGC AACATGGTGG CGGCAGGCCT TGGCATCGGC CTGCTGCCCA AGGCCAGTGT CAAGCCCTAT CTGCGCAACA GCACGCTGCG CATGGTCGAG CTGGATGAGA CGTGGGCACA GCGCCCGCTG TCTGTCATCA CGCGGGGCTA CGCGGCGCTG CCGGTGCCGG CCCGGCTGCT GATCGACCAT CTGGTATCCC AGGCCAGCGC AGAAAACTAG
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Protein sequence | MRFDLESLQV LVSVIEEGSL AAASERQHIV PSAISRRIAE LENDAGTALL YRHSRGVEPT PAGSALYYRA KRLIDQMQEI SSEMSEYAQG VRGHVRMHVN FSTMVQYLPG DLSSFLSINP DVKIDLMEKS SSQVLRSVEA GTADIGICSQ PEAAPGLEVR PYHVDRLVLI VPHDHPIGAA RHLRFADTLD YDYVSMPLGA SISTLCAQSA EQAGKQHKIR IQVTSFEGLR NMVAAGLGIG LLPKASVKPY LRNSTLRMVE LDETWAQRPL SVITRGYAAL PVPARLLIDH LVSQASAEN
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