Gene Rpic_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1372 
Symbol 
ID6286984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1470601 
End bp1471848 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID642624940 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_001898946 
Protein GI187928459 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.134715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0814825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGC TTGACGACCT GCAGGCGGGC CTAGCTGCTA TCGACGCCGC GCACCTGCGC 
CGCGTGCGCC GCACCGCGTA CAGCCCGACC GACCGCAGCC AGCGCATCAG CGTGCCCGGT
GAAGCGCCGC GCGACATTCT CGGCTTTTGC GGCAACGATT ATCTCGGCCT GGCAGCGCAT
CCGGCCTTGG TCGAGGCGAT GACGCAGGGC ACACAGCAAT ATGGCTTCGG CAGCGGCGCA
TCGCACCTGG TCAGCGGCCA TTCGATCGCG CACGCGCGGC TGGAAGCACG CATGGCTGCG
CTGCAAGGCG AACACATTCC CGAGGCGGAT GCGCTGTTCT TCTGCACGGG CTACATGGCC
AATCTGGCCG TGGTGAGTGC CATGGCGCAG GCTGGCGGCA TCCGGCCGGC GGAGGAATGC
ACGATCTTTT CCGATGCGCT GAACCACGCT TCGCTCATCG ACGGTGCGCG GTTGTCGCGG
GCGCCGATCA AGGTCTATCC GCACGTCGAC CTCGCTGCGC TGGAAGCGCT TCTGGCCGCG
AGCACCAGTC GCAACAAGCT GATCGTCACG GATGGCGTGT TCAGCATGGA TGGCGACATC
GCACCGCTGC CCGAACTGCT TGCGCTGGCC GAACGCTACG ACGCCTGGCT GATCGTGGAC
GACGCCCATG GTCTGGGCGT GCTGGGCGAG AACGGTGCGG GTGTGCTGTC TCATTTCGGG
CTGCACTCAC AGCGCATCAT CTATGTCGGC ACGTTCGGCA AGGCTGCCGG CGGCTCGGGC
GCGGCCATCG TCGGACATCG GCTGGTGATT GACTGGCTGG TGCAGCGCGC ACGCACGTAC
ATCTTCACAA CGGCCACGCC GCCGGGCATT GCGTGTGCGG TGGAAGCGGC ATTGGACCTG
ATCGCAAGCG AGGAGGGGGA TGAACGCCGC GCCCGCCTCG ATCGCCACAT CGCCGTGTGG
AGTGCGCACG CGCAGCGTTT GGCTGCGCGC TTCGGCTGGC AATGGATGCC ATCGCCCACG
GCCATTCAGC CGATCGTGAT TGGCGAGAAC GCACCCGCAT TGGCGCTGGC CGCCGCGCTC
GAACACGAAG GCATCCGCAT CGCCGCGATT CGCCCGCCGA CGGTGCCTGC AGGAACGGCA
CGCTTGCGCA TCACGCTGTC AGCGGCACAT ACCGATGCAG ACATCGAACG GCTTGCGCAG
GCGCTGGAAG CGGCCGGCCA ATCGCTGCAG CCGGCCAAGG CAGCCTGA
 
Protein sequence
MRLLDDLQAG LAAIDAAHLR RVRRTAYSPT DRSQRISVPG EAPRDILGFC GNDYLGLAAH 
PALVEAMTQG TQQYGFGSGA SHLVSGHSIA HARLEARMAA LQGEHIPEAD ALFFCTGYMA
NLAVVSAMAQ AGGIRPAEEC TIFSDALNHA SLIDGARLSR APIKVYPHVD LAALEALLAA
STSRNKLIVT DGVFSMDGDI APLPELLALA ERYDAWLIVD DAHGLGVLGE NGAGVLSHFG
LHSQRIIYVG TFGKAAGGSG AAIVGHRLVI DWLVQRARTY IFTTATPPGI ACAVEAALDL
IASEEGDERR ARLDRHIAVW SAHAQRLAAR FGWQWMPSPT AIQPIVIGEN APALALAAAL
EHEGIRIAAI RPPTVPAGTA RLRITLSAAH TDADIERLAQ ALEAAGQSLQ PAKAA