| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1317 |
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| Symbol | |
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| ID | 6288062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1411733 |
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| End bp | 1412677 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642624886 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001898892 |
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| Protein GI | 187928405 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.754776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.339821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTG CCCTCTCAGC GGATTTGCCG TCCCGCATCC GGTTTCGCCA TCTGAGCTGC
TTTGTCGCCA TCGCGCAGGA GCGCAACCTG CGGCGCGCCG CCGAGCGGTT GCATCTGAGC
CAGCCGGCGG TATCGAAAAC GCTGGGTGAA CTGGAGGCGC TGGCCGGCGT GCAGCTCGTG
GAGCGCGGCC GGCAAGGCGC ACGGCTCACT GCGGCTGGCG AGCAATTCCT GCGGCACGCG
GTCGGCGTGA CGCAGGCGCT GGAATCGGCC GCCGCCGCGC TGATGGGATC GACGGACGCA
TCCGCGCCGG TCGTGCATGT AGGCGCGCTG CCGACGGTGG CCAGCAGCCT GCTGCCCCGG
GCGATTGCCC ATTTGCACGC CCAGCGCCCG CATGCCGGCG TGCGGTTGCG CACCGGTACC
AATGTCGAGC TGCTGACTGC ACTCAAGGCC GGCGAACTCG ATTTCATCGT CGGGCGCATG
GCCGAGCCGG ATCGCATGCA GGGGCTGTCG TTCGAGTTGC TGTATGCCGA GCCGCTGGCG
CTGGTCGTCC GGCCCGGGCA TCCGCTGTTG TCGCAGCCAG GCGCGTCGGC CTCGCTGCAG
GCGGTGCTGG ACTACCCGCT GGTGATTGCC ACGCCGGGCA CGGTGCCGCG CCATCACACC
GAAGCGCTGT TCCAGACGCA CGGGCTGCGC TTGCCCGCGG GCGTGACGGA AACGCTTTCG
GTGTCCGTCG CACGGTTGCT GGCATGCCGA TCCGATGCGG TGTGGATCAC CCCCGAGCGC
GCTGCGGGCG ACGACCTGGC GCATGGTCAA CTTGCCCGTC TGGACATTGC CACGTCCGGC
ACCAAGGAGC CCGTCGGCCT GCTGCGCAGA AGCGCCGTCA CACCAAGCGA ACTGGCCAGC
GCGTTCATGG AACTGCTGAC GGAGCTGGCG CAGACGCCCG ACTGA
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| Protein sequence | MESALSADLP SRIRFRHLSC FVAIAQERNL RRAAERLHLS QPAVSKTLGE LEALAGVQLV
ERGRQGARLT AAGEQFLRHA VGVTQALESA AAALMGSTDA SAPVVHVGAL PTVASSLLPR
AIAHLHAQRP HAGVRLRTGT NVELLTALKA GELDFIVGRM AEPDRMQGLS FELLYAEPLA
LVVRPGHPLL SQPGASASLQ AVLDYPLVIA TPGTVPRHHT EALFQTHGLR LPAGVTETLS
VSVARLLACR SDAVWITPER AAGDDLAHGQ LARLDIATSG TKEPVGLLRR SAVTPSELAS
AFMELLTELA QTPD
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