Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1294 |
Symbol | |
ID | 6288107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1389733 |
End bp | 1390608 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624864 |
Product | hypothetical protein |
Protein accession | YP_001898870 |
Protein GI | 187928383 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00319958 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.43414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACC CCACCCTGGC GCGCGTCCAT GTCGACGAAC TCGCGCAGTT TCGCGAAATC CAGCAACTCG CCTACGCGTG CGTCGAGGCC GTCAGCGGCA TGCTGCGTCC CGGCATGACC GAGAAGGACG CGGCTAAGCT GCTCACTGAG TGGCTTGGCG ATCGTGGCGT CCATGACTGG CTGCACAAGC CGTTCGCGTG GTTTGGCGAC CGCACCGCGT TCCAGGGCTT TTCGGGCCTG ACGCATATGG CCGGCTTCAA CCTGGCGTTC TTTCCGTCGT CGCGACGGTT GGAAGAGAAC ATGCCGGTCA TCCTCGACGT GGCGCCCGTG CGCAATGGCG TGATCGCCGA TGTCGGCTAT GCCACGTGTC TCGGCGAAAA CGCCATCCTC GACCAGCTAC AGGACGACCT GATGGCGCAT CGCGAGTTGA TCGTGCGTTT GATCCGCGAG CGGCGGTCGA TGGCCGACGT GGCGCGTGCG GTGGACCAGC TTTGCATGAA GCAGGGCGTG GAGCCGCGTC ACAAGGCGTA TCCGTTCAAA GTGCTGGCGC ATCGCGTGGT CAAGCTCGAC AGCCCATTGA AGCCGCGTTT CGTGGCGCGC TTCGGGCTGA ACGCCACGCG CAACCTGATC CTCGACCAGG TGCGCAGCGG CAAGCAGGAG GGGTGGTCGC CGCTGTGGTC GATCGATCGT CGATCTGAGC ACGCGCCGGT CCCCGGCCTG TGGGCCGTCG AACCGCATCT GGGCTTCCAT GGCGTCGGGG CCAAGTTCGA GGAGTTGCTC GTCATTACCG AAGACGACGC CTACTGGCTC GACGACGATC TGCCGCACGT GCGCCGCTGG CAGCAGCGTC AACTCGCGCA GCAGCGCGCT GCCTGA
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Protein sequence | MPNPTLARVH VDELAQFREI QQLAYACVEA VSGMLRPGMT EKDAAKLLTE WLGDRGVHDW LHKPFAWFGD RTAFQGFSGL THMAGFNLAF FPSSRRLEEN MPVILDVAPV RNGVIADVGY ATCLGENAIL DQLQDDLMAH RELIVRLIRE RRSMADVARA VDQLCMKQGV EPRHKAYPFK VLAHRVVKLD SPLKPRFVAR FGLNATRNLI LDQVRSGKQE GWSPLWSIDR RSEHAPVPGL WAVEPHLGFH GVGAKFEELL VITEDDAYWL DDDLPHVRRW QQRQLAQQRA A
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