| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1270 |
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| Symbol | |
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| ID | 6286324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1358770 |
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| End bp | 1362285 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624840 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001898846 |
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| Protein GI | 187928359 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.845906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0711674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTCT CTTCGATCAA GCTCGCAGGC TTCAAGTCTT TCGTCGATCC GACCAATTTC
CATGTTCCGG GCCAGCTTGT CGGCATCGTC GGCCCGAACG GTTGCGGTAA ATCCAACATC
ATCGACGCCG TGCGCTGGGT GCTCGGCGAA TCACGCGCCG CGGAACTCCG TGGCGAATCG
ATGCAGGACG TCATCTTCAA CGGCTCGACC CAGCGCAAGC CGGCTGGCCG CGCCAGCGTC
GAACTCGTGT TCGACAACGC GGAAGGCCGC GCCGCCGGCC AGTGGAGCCA GTACGCCGAA
GTGGCGGTCA AGCGCGTGCT GAGCCGCGAT GGCACCTCGT CGTATTTCAT CAACAACCAG
GCGGTGCGCC GCCGCGACAT CCAGGACATC TTCCTCGGCA CGGGCCTGGG GCCGCGCGCC
TACGCCATCA TCGGGCAGGG GATGATCTCG CGCATCATCG AGGCCAAGCC CGATGACATG
CGCATCTTCC TGGAAGAAGC CGCGGGCGTG TCGAAGTACA AAGAGCGCCG CCGCGAAACC
GAAAACCGTC TGTCCGATAC GCGCGAAAAC CTCACACGCG TGGAAGACAT CCTGCGCGAA
CTCGGCTCCA ATCTCGAAAA GCTTGAGGGC CAGGCCGAAG TCGCGCAGCG CTTCCAGGCG
CTGCAGGCCG ACGGCGAAGA GAAGCAGCAC CTGCTGTGGC TGCTGCGCAA GCGTGAAGCG
CAAGGCGAGC AGGAACGCCA TCAGCGCGCC ATCGAACAGG CGCAGATCGA CCTGGAAGCG
CAGACCGCGC AGTTGCGCCA TATCGAGGCT GAACTCGAAA CGATGCGCGT TGCGCATTAC
GCCTCGTCCG ATGCGATGCA CGCCGCGCAG GGCGCGCTCT ACGAAGCCAA CTCCGAAGTC
AGCCGTCTGG AAGCCGAGAT CCGCTACGTG GTGGAATCGC GCAACCGCAT CCAGCAGCAG
ATCGCCACGC TGACCGCGCA GCAGGAGCAG TGGCATACGC AGGGCGATCA GGCGCAGGAA
GACCTTGCCG CGGCCGAGGA AGAGTTGGCC ATGGCCGAGG AGCGTGCCGC GCAGGCCGCC
GAAGACGTCG CGCGCAAAGC CGACGAACTG CCCGGCATGG AGGCGCAATG GCGGGACGCG
CAGACCGCGC TGAACGATCA GCGCGCCGCG ATCCTGCAGT CGGAACAGGC GCTCAAGCTC
GAAGCCGCGC ACCAGCGCAA TGCCGACCAG GCCCTGCTGC AGCTTGAGCA GCGCCGCGAA
CGTCTGACGC AGGAGTCCTC CGGCCTCGAC AAGCCGGATG ACGTGCAACT CGAAACGCTG
CGTGCCGAAC TGGCTGAGCA GGAAGAAGTG TTGGCCGAAG CGCAGGCCGC GCTGGAAGAC
GCCGAGACAC AGGTGCCGCA GCTCGACGAG GCACGCCGTG CCGCGCAAGA CCGCGTGCAA
TCGGAAGCCG CCGCCATTGC CAGCCTGGAA GCCCGCCTTG CCGCGCTCAA GCAACTGCAG
GAGAACGTGC AGACCGACGG CAAGGTCCAG CCGTGGCTGG CCAAGCATGA ACTGAGCGAG
CTGCCGCGCT TCTGGAAGAA GCTGCAGATC GAGCAGGGCT GGGAGCCCGC GCTCGAAGCG
GTGCTGCGTG AAAAGCTTGG CGCGCTCGAA GTCTCCAACC TCGATTGGAT CAAGGCGTTT
GCGGCTGACG CGCCGCCCGC CAAGCTCGCC TTCTATGCGC CGCCGCCTGC AGCGCGTCCG
GTGGAAGCGC CGGCGGGGCT GCGTCCGCTG ATGTCGCTGG TGCAAGTGAC GGAGCCGGGC
ATTCGTGCCG TGCTGCAAGA CTGGCTGGCC GACGTCTATG TCGCCGACGA CATGCAGGCC
GCGCTCGCCG CGCGTCAGAC GCTGCCGGAA GGCGGCACGT TCGTCATCAA GGCCGGGCAC
TTGATTGGCC GGTCGTCGGT GCAGTTGTAC GCGCCTGATT CCGAGCAGGC CGGCATGCTG
GCGCGTGCGC AGGAAATCGA AAACCTGCAC AAACAGGTGC GTGCGCAGAT GCTGTTGGCC
GACGAGGCTA AGAGCGCTGC CGTGCGCGCC GAAGCGGCGT ACAGCCAGGC CAGCCAAAAC
CTCACGCAGG TGCGGGCCCG CGCCGAGCAG GCCACGCGCC GCGTGCACGT GCTGCAGATG
GACGTGCTCA AGCTGTCGCA AGCGATGGAG CGCTACAACG CGCGCAGCGG CCAGATCGAC
AGCGAGCTGG AAGAGATTCG CGCGCAGATC GAAGAGCAGC GTGCCATCCG TGCCGAGTCC
GAAGCGGCCT TCGAACAGCA CGATGCGGCA CTCGCCGATA TGCAGGCGCG CTTTGAAGAC
AGCCAGCAGG CGTTCGAGGC GCTCGAAGTT CGCCTGAGCG ATGCGCGCAA CGCCTTGCGC
GACCAGGAGC GCGGCGCACA GGAAGCCCAC TTTGCCGAGC GCAATCTGCA GAACCGCATT
GCCGAACTGA AGCGCAACAT CCAGGTGGCG AGCGATCAGG CGCAGCAGAT CGTGCTGACG
CTGGAGAACG CGCGCGCAGA GTTGGAGACC ATCAACGAGC AGACCGCGCA TACCGGTTTG
CAGGAAGCGC TGGAGCGCCG TGCCGAGAAG GAAGAAAAGC TCGGGTTGGC GCGCATGGAA
CTGGATGCAC TCACCGCACA ACTGCGCACG CACGACGAGC AACGCCTGAG CGCCGAGCGC
GGCCAGCAAC CACTGCGCGA TCGTATTACC GAGCTGCAGT TGAAGGAGCA GGCCGCGCGC
CTGAACCAGG AGCAGTTCAC CGAGCAGCTC ACCGCTGCCA ACGTGGACGA GGCCGTCCTG
GCCGAACGCC TGACCGGCGA CCTGAAGCCT TCGTACCTGC AAGGTGAAGT CACGCGCATC
AACAACGCCA TCAACGCGCT CGGCCCGGTC AACATGGCCG CGCTCGACGA GCTGGCGGCG
GCGCGCGAGC GCAAGGGCTT CCTGGATGCG CAATCGGCCG ATTTGACCGA CGCCATCACC
ACGCTGGAAG ATGCCATCCG CAAGATCGAT CAGGAAACGC GCGCGCTGCT CCAAGGCACG
TTCGACCAGG TCAACTATCA CTTTGGCGAG CTGTTCCCGA CGCTGTTCGG CGGCGGCCAG
GCCAAGCTGA TGATGACCGG CGAGGAGATT CTCGACGCGG GCGTGCAGGT GATGGCGCAG
CCGCCGGGCA AGAAGAACTC GACCATTCAC CTGCTGTCGG GCGGCGAGAA AGCGCTGACC
GCGATTGCGC TGGTGTTTGC GATGTTCCAG CTGAACCCGG CCCCGTTTTG TTTGCTCGAC
GAGGTGGACG CGCCGCTGGA CGACGCCAAC ACCGAGCGCT ACGCCAACAT GGTCAAGCGC
ATGTCCGACA AGACCCAATT CGTTTTTATT TCTCACAACA AGATTGCGAT GGAAATGGCG
CAACAGCTCA TCGGTGTGAC CATGCAGGAA CAAGGTGTGT CCCGGATCGT GGCGGTGGAT
ATGGATGCCG CGCTGACCAT GGCGGAGGCT GCATAA
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| Protein sequence | MRLSSIKLAG FKSFVDPTNF HVPGQLVGIV GPNGCGKSNI IDAVRWVLGE SRAAELRGES
MQDVIFNGST QRKPAGRASV ELVFDNAEGR AAGQWSQYAE VAVKRVLSRD GTSSYFINNQ
AVRRRDIQDI FLGTGLGPRA YAIIGQGMIS RIIEAKPDDM RIFLEEAAGV SKYKERRRET
ENRLSDTREN LTRVEDILRE LGSNLEKLEG QAEVAQRFQA LQADGEEKQH LLWLLRKREA
QGEQERHQRA IEQAQIDLEA QTAQLRHIEA ELETMRVAHY ASSDAMHAAQ GALYEANSEV
SRLEAEIRYV VESRNRIQQQ IATLTAQQEQ WHTQGDQAQE DLAAAEEELA MAEERAAQAA
EDVARKADEL PGMEAQWRDA QTALNDQRAA ILQSEQALKL EAAHQRNADQ ALLQLEQRRE
RLTQESSGLD KPDDVQLETL RAELAEQEEV LAEAQAALED AETQVPQLDE ARRAAQDRVQ
SEAAAIASLE ARLAALKQLQ ENVQTDGKVQ PWLAKHELSE LPRFWKKLQI EQGWEPALEA
VLREKLGALE VSNLDWIKAF AADAPPAKLA FYAPPPAARP VEAPAGLRPL MSLVQVTEPG
IRAVLQDWLA DVYVADDMQA ALAARQTLPE GGTFVIKAGH LIGRSSVQLY APDSEQAGML
ARAQEIENLH KQVRAQMLLA DEAKSAAVRA EAAYSQASQN LTQVRARAEQ ATRRVHVLQM
DVLKLSQAME RYNARSGQID SELEEIRAQI EEQRAIRAES EAAFEQHDAA LADMQARFED
SQQAFEALEV RLSDARNALR DQERGAQEAH FAERNLQNRI AELKRNIQVA SDQAQQIVLT
LENARAELET INEQTAHTGL QEALERRAEK EEKLGLARME LDALTAQLRT HDEQRLSAER
GQQPLRDRIT ELQLKEQAAR LNQEQFTEQL TAANVDEAVL AERLTGDLKP SYLQGEVTRI
NNAINALGPV NMAALDELAA ARERKGFLDA QSADLTDAIT TLEDAIRKID QETRALLQGT
FDQVNYHFGE LFPTLFGGGQ AKLMMTGEEI LDAGVQVMAQ PPGKKNSTIH LLSGGEKALT
AIALVFAMFQ LNPAPFCLLD EVDAPLDDAN TERYANMVKR MSDKTQFVFI SHNKIAMEMA
QQLIGVTMQE QGVSRIVAVD MDAALTMAEA A
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