Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1235 |
Symbol | |
ID | 6287697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1322915 |
End bp | 1323613 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624805 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_001898811 |
Protein GI | 187928324 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.194686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.923531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGA TTCGGGCGGT GGTGTTCGAT GCCTATGGCA CGTTGTTCGA CGTGTATTCC GTGGCCGCGC GCGCCGAGCA ACTGTTTGCC GGCAAGGGCG AAGCACTGTC GGTGCTGTGG CGCGACAAGC AGATCGACTA CACGCGCATC CGCTCGCTGG CCGGCCCCTC GGGTGAACAC TACAAGCCGT TCTGGGACAT CACCGTCGAT GCGCTGCGCT ATGCGGCGGC ACGCCTGGGC GTAGAGCTTT CCGCCCACGA CGAAGCCACG CTGATGCGCG AATATGCCTG CCTGTCGGCG TTTCCCGAGA ACGTGCCCGC GCTGCGCCGC CTGCGTGAGA TGGGCTTGCC GCTGGGCATC CTCTCCAACG GCAACCCGCA GATGCTCGAC ATTGCCGTGA AGAGTGCCGG CATGTCCGGG CTGTTCGATC ACGTGCTGTC GGTCGACGCG GTCAAGCTCT ACAAGACCGC GCCGCAGGCC TATGCGCTGG CGCCACAAGC GTTTGGTGTG CCGGCGGAAC AGATTCTGTT TGTCTCGTCC AATGGCTGGG ATGCCTGCGG CGCGACGTGG TACGGCTTCA CAACGTTCTG GATCAACCGC CTGGGGCATC CGCCCGAGGC ACTCGACGTG GCGCCTACCG CGGCCGGCCA CGATATGCGC GATCTGCTGC AGTTCGTGCA GGCAACACAA GCGACGTAA
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Protein sequence | MRSIRAVVFD AYGTLFDVYS VAARAEQLFA GKGEALSVLW RDKQIDYTRI RSLAGPSGEH YKPFWDITVD ALRYAAARLG VELSAHDEAT LMREYACLSA FPENVPALRR LREMGLPLGI LSNGNPQMLD IAVKSAGMSG LFDHVLSVDA VKLYKTAPQA YALAPQAFGV PAEQILFVSS NGWDACGATW YGFTTFWINR LGHPPEALDV APTAAGHDMR DLLQFVQATQ AT
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