Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1189 |
Symbol | |
ID | 6287723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 1275886 |
End bp | 1276635 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642624759 |
Product | NLP/P60 protein |
Protein accession | YP_001898765 |
Protein GI | 187928278 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.103363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0364754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACGC GGCACAGCTT TCCCCACGGC AACATGCGAC TGGCAGGCGC CGCCCTGCTG GCGCTGGTGT GCCTGCTGTC CGCATGCTCC TCGACCCCGA CCCGCTCCAC CGCCTCGCGC GATACTGGCC TGCGCACGCG CGGCGCCCCG ATCCAGGATC CGAGCGCCGG TCTGGAAGAA ATCTCCATCG AAGCCATGGC GCTGGTCGGC ACGCCCTACC GCTACGGCGG CAATACACCC GACAGCGGCT TCGATTGCAG CGGGCTCGTG CGCTACGTCG TGCAACGCGC TGCGTCTGTG AACCTGCCGC GTACCGCCGC CGAAATGGGC CGCCGCGGCA CCTCACTGGA TCGCCGCGAT GTTGCATCGG GCGACCTCGT CTTCTTCAAC ACGACCGGCC AGCCGAACTC GCACGTGGGC ATCTATGTCG GGCAGAACCG GTTTGTCCAC GCACCGGCCA CAGGCGGCAC GGTGCGCCTT GAAGACATGA CCAAGTCTTA TTGGGCCAAC CGCTACGGGG GCGCACGCCG TGTCGTGGCC GTGAGCAACC TGCCCGATGC ACCGGCGCCG ACCATCGCCC CCATCACGCC GGCGCCCGTC AGCCCTGCCA GCCCAATCGA CGATGATCCG CTCGGTACCC TCGCCCGCAC ACGCGATGCT CAGGCCGACA GCCTGATGTC GACACGCGTG CCGGCGGCTG CGACGCCGCC TGCGGATGAC GACCCCATCG CGCGCTTTGC CACGCAGTAG
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Protein sequence | MLTRHSFPHG NMRLAGAALL ALVCLLSACS STPTRSTASR DTGLRTRGAP IQDPSAGLEE ISIEAMALVG TPYRYGGNTP DSGFDCSGLV RYVVQRAASV NLPRTAAEMG RRGTSLDRRD VASGDLVFFN TTGQPNSHVG IYVGQNRFVH APATGGTVRL EDMTKSYWAN RYGGARRVVA VSNLPDAPAP TIAPITPAPV SPASPIDDDP LGTLARTRDA QADSLMSTRV PAAATPPADD DPIARFATQ
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