| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1189 |
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| Symbol | |
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| ID | 6287723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1275886 |
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| End bp | 1276635 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642624759 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001898765 |
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| Protein GI | 187928278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.103363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0364754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGC GGCACAGCTT TCCCCACGGC AACATGCGAC TGGCAGGCGC CGCCCTGCTG
GCGCTGGTGT GCCTGCTGTC CGCATGCTCC TCGACCCCGA CCCGCTCCAC CGCCTCGCGC
GATACTGGCC TGCGCACGCG CGGCGCCCCG ATCCAGGATC CGAGCGCCGG TCTGGAAGAA
ATCTCCATCG AAGCCATGGC GCTGGTCGGC ACGCCCTACC GCTACGGCGG CAATACACCC
GACAGCGGCT TCGATTGCAG CGGGCTCGTG CGCTACGTCG TGCAACGCGC TGCGTCTGTG
AACCTGCCGC GTACCGCCGC CGAAATGGGC CGCCGCGGCA CCTCACTGGA TCGCCGCGAT
GTTGCATCGG GCGACCTCGT CTTCTTCAAC ACGACCGGCC AGCCGAACTC GCACGTGGGC
ATCTATGTCG GGCAGAACCG GTTTGTCCAC GCACCGGCCA CAGGCGGCAC GGTGCGCCTT
GAAGACATGA CCAAGTCTTA TTGGGCCAAC CGCTACGGGG GCGCACGCCG TGTCGTGGCC
GTGAGCAACC TGCCCGATGC ACCGGCGCCG ACCATCGCCC CCATCACGCC GGCGCCCGTC
AGCCCTGCCA GCCCAATCGA CGATGATCCG CTCGGTACCC TCGCCCGCAC ACGCGATGCT
CAGGCCGACA GCCTGATGTC GACACGCGTG CCGGCGGCTG CGACGCCGCC TGCGGATGAC
GACCCCATCG CGCGCTTTGC CACGCAGTAG
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| Protein sequence | MLTRHSFPHG NMRLAGAALL ALVCLLSACS STPTRSTASR DTGLRTRGAP IQDPSAGLEE
ISIEAMALVG TPYRYGGNTP DSGFDCSGLV RYVVQRAASV NLPRTAAEMG RRGTSLDRRD
VASGDLVFFN TTGQPNSHVG IYVGQNRFVH APATGGTVRL EDMTKSYWAN RYGGARRVVA
VSNLPDAPAP TIAPITPAPV SPASPIDDDP LGTLARTRDA QADSLMSTRV PAAATPPADD
DPIARFATQ
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