Gene Rpic_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1144 
Symbol 
ID6288441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1218099 
End bp1219460 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content64% 
IMG OID642624715 
ProductGlycine C-acetyltransferase 
Protein accessionYP_001898722 
Protein GI187928235 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGG GCGACCAGTT GCGACAGCAG CTTGCTGCTA AGGCCCTGAA GCGGCAGCTT 
GATCGGGTCA CGAAAGAAAT GGAGACGGGA GCCGAACGGG CGGCAGTTGC GGCCCATACC
GGTGAAGCGT CGGCAGCACA GCCGGTCAAT CCGGCGGACT ATGCGGCACT GTGCCGCTTC
GACACGCTGC CTGCGTACCA GCAGGTCTCG ATCATCCGCG AGGTAAGCGA GCGTTTGGGC
ATTGCGTCGC CGTTCTTCCG CGTCCACGAA GGCGTGGCCG GGGCCACCAC GCAGATCAAC
GGCCAGTCCT ATATCAACTT CGCCAACTAC AATTATCTCG GCCTATCCGG GGATGCTGAG
GTATCGGCCA GCGCCAAAGC CGCAGTCGAC CAGTATGGCA CCTCGGCGTC GGCAAGCCGC
ATGGTGGCCG GCGAGCGGCC GGTCCAGCGC GAGCTAGAGC GCGCGCTGGC AAGCGTCTAC
GAGGTCGACG ACTGCGTCGC CTTCGTCAGC GGGCATGCCA CCAACGTCAC CGTGATCGGA
TGCCTGTTTG GCCCCGGCGA CCTGATCGTG CATGACGCGT TGGCGCACAA CAGCATCGTG
CAGGGGGCGC AGCTCAGCGG CGCCAAGCGG CTGAACTTCC CGCATAACGA CTGGGCAGCG
CTTGACGCCC TGCTCACGCG CGTGCGGCGC GACTACCGCC GTGTGCTGAT CGCCGTGGAA
GGCATCTACA GCATGGATGG AGACTTCCCC GAGCTGGAAC GCTTCATCGA CATCAAGCGC
CGCCACGGTG CCTTCCTCAT GGTCGACGAA GCGCACTCGT TCGGCGTGCT CGGTGCGACA
GGCAAAGGCA TCCGGGAGCA TTTCGGGCTG GCCGGCCGCG ACGTCGATAT CTGGATGGGG
ACTTTCAGCA AGACGCTGGC GGGCTGCGGC GGGTACATCG CCGGCGAGCA GGCGCTGATC
GACATCCTGC GCCACCTGGC ACCCGGTTTC CTGTACAGCG TTGGATTGTC ACCGGTGCTG
GCCGCCACCT CGCTGACCGC TCTTCGGCGC ATGCTGGATG AGCCGCAACG AGTCGCCAAG
CTGCGCGAGC GCGGACGTCA GTTCCTGGAC GCCGCACGTG AAGCGGGCCT CAACACGGGG
CTGAGCGCCG GATACTCGGT CGTGCCAGTG ATTATCGGCA GTTCGCTCAA GGCCGCGCAA
TGGGCCAATG CACTGTTCGA GAAAGGCATC AACACGCAGC CGATCTTTTA TCCCGCGGTG
GAGGAGAAAG CCGCGCGGCT GCGCTTCTTT ATCTGCTCCA CCCACACGCC GGAACAGATC
GCTTATACGA TAGCGTCCGT TGCGCAGCTG GCACGGCGTT AG
 
Protein sequence
MRLGDQLRQQ LAAKALKRQL DRVTKEMETG AERAAVAAHT GEASAAQPVN PADYAALCRF 
DTLPAYQQVS IIREVSERLG IASPFFRVHE GVAGATTQIN GQSYINFANY NYLGLSGDAE
VSASAKAAVD QYGTSASASR MVAGERPVQR ELERALASVY EVDDCVAFVS GHATNVTVIG
CLFGPGDLIV HDALAHNSIV QGAQLSGAKR LNFPHNDWAA LDALLTRVRR DYRRVLIAVE
GIYSMDGDFP ELERFIDIKR RHGAFLMVDE AHSFGVLGAT GKGIREHFGL AGRDVDIWMG
TFSKTLAGCG GYIAGEQALI DILRHLAPGF LYSVGLSPVL AATSLTALRR MLDEPQRVAK
LRERGRQFLD AAREAGLNTG LSAGYSVVPV IIGSSLKAAQ WANALFEKGI NTQPIFYPAV
EEKAARLRFF ICSTHTPEQI AYTIASVAQL ARR