Gene Rpic_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1101 
Symbol 
ID6287709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1176066 
End bp1176908 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID642624674 
Productputative lipoprotein 
Protein accessionYP_001898681 
Protein GI187928194 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG2045] Phosphosulfolactate phosphohydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG AATTCAGCCT GTACAACATC CACTGTGAAT GGGGCGAGCA CGGAGCATCC 
GCGCTGGCGC CACATTGCGA CGCCGTCATC GTCGTGGACG TGCTGTCCTT CTGCACCTGT
GTGGACGTGG CCGTGGCGCG CGGGGCACGG ATCTATCCGT ACCCATGGCG CGACGCCAGC
GCTGAAACCT TCGCGCGCCG CGCAGGTGCC ATGCTGGCGG GCTACAACCG AAGCCAGGCG
GGCTATACGC TCTCGCCAGC GTCGCTGCGT GAATTGCCAA TGGGCAGCAG CCTCGTCCTG
CCCTCGCCTA ATGGGGCAAC GCTGGCACTC GCCACCGGAT CGACGCCGAC GTTTGCTGGC
TGCCTGCGCA ACGCGCGTGC GGTAGCTGAA GCGGCCTCGC GGCTGGGCCG ACGCGTGGCC
GTGGTGGCAT CAGGAGAGCG CTGGGCCGAC GGCAGCCTGC GCCCAGCCCT GGAAGACTGG
CTGGCCGCCG GTGCGATCGT GCACCACCTG TCGGAAACGG TGGCGGGGTT CCTGCCGCAA
GCGCTGTCGC CGGAAGCGCT CGCGGCCCGC GCGATCTATC GCGAGGCGTC GCAGACCGGC
ATGATGAAAG CGTGGCTGCT TGATTCGGTA TCGGGCCGCG AGCTGTGCGA ACGCGGCTTT
ACCGAAGACG TGACCATGGC CTCGCAAACC GATGTGAGCA ACGTCGCCCC CATGCTGGTG
GAAGGCGCGT TCCGCAACGT CAATCGCAAG ACCGAACGCC TGCCGCAGGA CTTCTTTGGC
GCAAACCTGC GGCCCGCGCA GGCACCGCCG TCGCACCGCA ACCCGCCACC GACGTCACAC
TAG
 
Protein sequence
MATEFSLYNI HCEWGEHGAS ALAPHCDAVI VVDVLSFCTC VDVAVARGAR IYPYPWRDAS 
AETFARRAGA MLAGYNRSQA GYTLSPASLR ELPMGSSLVL PSPNGATLAL ATGSTPTFAG
CLRNARAVAE AASRLGRRVA VVASGERWAD GSLRPALEDW LAAGAIVHHL SETVAGFLPQ
ALSPEALAAR AIYREASQTG MMKAWLLDSV SGRELCERGF TEDVTMASQT DVSNVAPMLV
EGAFRNVNRK TERLPQDFFG ANLRPAQAPP SHRNPPPTSH