| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1081 |
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| Symbol | |
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| ID | 6286138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1152661 |
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| End bp | 1153494 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624654 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001898661 |
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| Protein GI | 187928174 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCG GCCTGTCGAT GTTGCGCACG GCCGCCGCTG CCACAGCGGC GCTGGGCCTG
TGCGCGTTGG CCGCGGCTGC ACCCGGTGGT GTGAACGCCG GTGCGTGCAA AGGCACCGTT
TACCTCACTT TCGACACCGG CAGCATGAGC CAGGCGCAGT TGATTGCCGA TACGCTGCGT
CGCCATCGCA TCCACGCCAC GTTCTTCCTC GCCAACGAAA AGACCATCCA CGGCGACAGC
ACGCTGGATG ACGGCTGGGC CCCGTATTGG AGATCGCTAG CCGCCGACGG CCACGCCTTC
GGTACGCACA CCTTCGATCA CGTCTACTAC AAGGGCGAGG CAGGTGCGGG CAAGGTCCGC
TTCCGCCCGC AGTTTGGCGA GGAGGGTGGC CGCAATGTCG TGTGGAGTGA GCCCGAATTC
TGTGCGGAGC TCAAACGCAG CGCCGAGCGC TTCAAGGCCA TGACCGGTCA GCCGATGGAC
CCGCTGTGGC GTGCGCCGGG TGGTCACTTT TCGGCGACGA CAGAGGCTTG GGCGAAGCAA
TGCGGGTTCG CCCACGTGGC CTGGGCGCCC GCCGGTTTCC TGGGCGACGA GTTGCCGTCC
GAGCGTTATC CGAACGACGC GTTGCTGCAG AAGGCGCTGT CCAGCTTGCG CGATGGCGAC
ATCACCATGG CGCACCTTGG CATCTGGTCG CGTAGGGATC CGTGGGCGCC GGCTGACCTT
GAGCCGCTGA TCACCGGCCT GGAACGCAAG GGTTTCTGCT TCGCCACGCT GCGCGATCAT
CCGCAGTACC AAGCCTGGTT GGGTGCCCAC CCGGCACACA CAGCGGCCCG CTGA
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| Protein sequence | MKPGLSMLRT AAAATAALGL CALAAAAPGG VNAGACKGTV YLTFDTGSMS QAQLIADTLR
RHRIHATFFL ANEKTIHGDS TLDDGWAPYW RSLAADGHAF GTHTFDHVYY KGEAGAGKVR
FRPQFGEEGG RNVVWSEPEF CAELKRSAER FKAMTGQPMD PLWRAPGGHF SATTEAWAKQ
CGFAHVAWAP AGFLGDELPS ERYPNDALLQ KALSSLRDGD ITMAHLGIWS RRDPWAPADL
EPLITGLERK GFCFATLRDH PQYQAWLGAH PAHTAAR
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