| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0961 |
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| Symbol | |
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| ID | 6289613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1017598 |
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| End bp | 1018326 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624529 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001898541 |
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| Protein GI | 187928054 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00749478 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0189235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGG CCGTCATGAC TTCGATGGAA GCGCCTGCCG CGGCGCCGCA GGGTGGGGTG
GTGCAAGCCG AAGGGCTGTC CAAGTCGTTC CGCCAGGGCG GGTTGAACGT CGACGTGCTC
AAGGGCGTGG ATATCCGCAT CGGCGTGGGC GAGAAGGTCG CCATCGTCGG CGCCTCCGGT
TCGGGCAAGA GCACGCTGCT GCATGTGCTG GGCGGGCTGG ATGAGCCGAC GTCGGGCCGC
GTCTCTCTGC TCGGCAAGCC CTTCACCGCC ATGAAAGAGC GCGAGCGCAA CACGTTGCGC
AACCAGGCGC TGGGCTTTGT CTATCAGTTC CACCATCTGC TGCCCGAATT CACCGCGCTG
GACAACGTCG CGATGCCACT GCGTATCCGG GGCGTGGAAG AAGCGCAAGC GCGCCACACC
GCACAGGCGA TGCTCGAACG CGTGGGTCTG GGCCCGCGCA CGGCACACCG TCCGGGTGAG
CTGTCCGGCG GCGAGCGTCA GCGCGTGGCG ATTGCGCGCG CGCTGGTCGG GTCTCCGGCT
TGCGTGCTGG CTGACGAGCC TACCGGCAAC CTTGACGATC ACACCGCTGG TGAAGTGTTT
GACCTGATGC TGGAACTCAC GCGCACGCTG GGCACGAGCT TTGTCATCGT CACGCACGAT
ATCGAACTGG CCGGCCGCTG CGACCGCATC TTCCGCCTGC GGGACGGCCA TCTGCACCAG
GAGCGCTAA
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| Protein sequence | MSEAVMTSME APAAAPQGGV VQAEGLSKSF RQGGLNVDVL KGVDIRIGVG EKVAIVGASG
SGKSTLLHVL GGLDEPTSGR VSLLGKPFTA MKERERNTLR NQALGFVYQF HHLLPEFTAL
DNVAMPLRIR GVEEAQARHT AQAMLERVGL GPRTAHRPGE LSGGERQRVA IARALVGSPA
CVLADEPTGN LDDHTAGEVF DLMLELTRTL GTSFVIVTHD IELAGRCDRI FRLRDGHLHQ
ER
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