Gene Rpic_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0921 
Symbol 
ID6288104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp975057 
End bp975689 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID642624485 
Productanti sigma-E protein, RseA 
Protein accessionYP_001898503 
Protein GI187928016 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.194686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.151017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGG CTCAATTGCA AACGGCAGAA GCGGAGTTCG CACAACGCAT CTCTGCCTTG 
ATGGACGGTG AGGTTGCGGC GCACGAAGTG CCGGCTGCCG TGGAACTCGC CAAGGAAGGC
GAGGGTGCGG CGCATTGGCG AGAATATCAA CTGATCGGCG ACGTGCTCCG GTCAGAAGAT
CTGCTGAACA CGCATTCCTC GGAAGATTTC CTCCGCCGGT TCTCGGCCAA GCTCGACGCC
GAGCCTCATC TGCTGGTACC GGCTGTAGCG CAGCGTGCGA AAACCCAAGA GAGGCACCGT
TTCCTGGTCA GCCCCGCTTG GGTCCGACGG ATCATGCCTA CAACCGCAGT GGCGGCGGCA
GTGGCGGCCG TTAGCTGGGT CGTCGTTCCG CAACTGCGCG GACCTGCGGA TGGTGCGGAA
GGCTCTCCCG CACTGGTCGC CAAGGCGACG CAAGGTGCCG GCGCGCAGGC GCTAACTGTG
GCGGCAGCTG ACAATACGCC GATGATCCGC GACGCCCGGC TGGACGAATA CCTGAGCGCC
CACAGGCAAT CTGCGACCAA CGGGATGGTA GTTCCGTATC TGCGCGCAGT GGCCAATGGG
GTGGCGAACA CCCAGGACTC CAATCAGGAA TAA
 
Protein sequence
MGQAQLQTAE AEFAQRISAL MDGEVAAHEV PAAVELAKEG EGAAHWREYQ LIGDVLRSED 
LLNTHSSEDF LRRFSAKLDA EPHLLVPAVA QRAKTQERHR FLVSPAWVRR IMPTTAVAAA
VAAVSWVVVP QLRGPADGAE GSPALVAKAT QGAGAQALTV AAADNTPMIR DARLDEYLSA
HRQSATNGMV VPYLRAVANG VANTQDSNQE