| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0870 |
|---|
| Symbol | |
|---|
| ID | 6286342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 921649 |
|---|
| End bp | 922236 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624434 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001898452 |
|---|
| Protein GI | 187927965 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.359532 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGC TTGAACCGTC CGCGCTGGAC CAACTGTTCC ACGCAGCCCG TACGCATAAC
GTGTGGCTGG ACAAGCCGGT CGATGACGAA CTGCTGCACA CGTTGTACGA CACCGTGAAG
TACGGTCCGA CCGCAGCCAA CAGCACGCCG GCCCGCTTCG TGTTCGTCAA GAGCGCCGCC
GCCAAGGAGC GCCTGATTCC GTGCATGTCG GCCGGCAATC AGGAAAAGAC CCGCCAGGCA
CCCGTGGCCG TGATCGTTGC GTACGACACG CAATTCCACG AGCAACTGCC CAAGTTGTTC
CCGCACACCG ATGCGCGTTC GTGGTACGCC GGCGACCAAG CCAAGATCAA TGCCGCCGCG
CTGATGAACG GCTCGCTGCA GGGCGGCTAT CTGGTGCTCG CCGCCCGCGC GCTCGGCCTG
GACTGCGGCC CAATGGCCGG CTTCGATGCC AACAAGGTGA ACGAGACGTT CTTCCCCGAT
GGCCAGTGGA AGGTCAACTT CATCATGAAC ATCGGCTACG GCGACGCCGA GAAGCTGCAC
CCGCGCAACC CGCGCCTGTC GTTTGAAGAG GCGTGCAAGA TCGTTTGA
|
|---|
| Protein sequence | MPMLEPSALD QLFHAARTHN VWLDKPVDDE LLHTLYDTVK YGPTAANSTP ARFVFVKSAA
AKERLIPCMS AGNQEKTRQA PVAVIVAYDT QFHEQLPKLF PHTDARSWYA GDQAKINAAA
LMNGSLQGGY LVLAARALGL DCGPMAGFDA NKVNETFFPD GQWKVNFIMN IGYGDAEKLH
PRNPRLSFEE ACKIV
|
|---|
| |